Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLDN6P56747 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 FAM226B-201ENST00000602508 1490 ntBASIC13.17□□□□□ -0.3
CLDN6P56747 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CLDN6P56747 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 AC015802.1-201ENST00000588104 1449 ntBASIC13.17□□□□□ -0.3
CLDN6P56747 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 AC041040.1-201ENST00000425197 460 ntBASIC13.17□□□□□ -0.3
CLDN6P56747 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC13.17□□□□□ -0.3
CLDN6P56747 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.17□□□□□ -0.3
CLDN6P56747 AC099328.1-201ENST00000498809 1030 ntBASIC13.17□□□□□ -0.3
CLDN6P56747 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN6P56747 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 INO80E-209ENST00000567254 625 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN6P56747 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 AP001462.1-201ENST00000594089 452 ntBASIC13.17□□□□□ -0.3
CLDN6P56747 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 LILRP2-202ENST00000413572 1383 ntBASIC13.17□□□□□ -0.3
CLDN6P56747 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN6P56747 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN6P56747 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN6P56747 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN6P56747 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN6P56747 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN6P56747 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN6P56747 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN6P56747 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN6P56747 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CLDN6P56747 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN6P56747 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CLDN6P56747 KRT8P38-201ENST00000441370 1430 ntBASIC13.16□□□□□ -0.3
CLDN6P56747 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN6P56747 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN6P56747 GUCY2EP-203ENST00000531117 1918 ntBASIC13.16□□□□□ -0.3
CLDN6P56747 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN6P56747 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN6P56747 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLDN6P56747 GGTLC4P-201ENST00000402176 664 ntBASIC13.16□□□□□ -0.3
CLDN6P56747 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN6P56747 AC092910.2-201ENST00000491262 348 ntBASIC13.16□□□□□ -0.3
CLDN6P56747 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN6P56747 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLDN6P56747 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN6P56747 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN6P56747 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN6P56747 AC009041.4-201ENST00000620075 638 ntBASIC13.16□□□□□ -0.3
CLDN6P56747 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN6P56747 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN6P56747 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
CLDN6P56747 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN6P56747 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLDN6P56747 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN6P56747 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLDN6P56747 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN6P56747 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms