Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NALT1-202ENST00000450304 437 ntTSL 3 BASIC12.27□□□□□ -0.45
GFRA1P56159 AL135901.1-201ENST00000451812 333 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.27□□□□□ -0.45
GFRA1P56159 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.27□□□□□ -0.45
GFRA1P56159 AQP7P2-201ENST00000453967 1041 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.27□□□□□ -0.45
GFRA1P56159 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.27□□□□□ -0.45
GFRA1P56159 RN7SL351P-201ENST00000469306 248 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.27□□□□□ -0.45
GFRA1P56159 RN7SL818P-201ENST00000485099 259 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 PGAM1P12-201ENST00000505622 748 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 AC026410.1-201ENST00000507366 1101 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.27□□□□□ -0.45
GFRA1P56159 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.27□□□□□ -0.45
GFRA1P56159 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC12.27□□□□□ -0.45
GFRA1P56159 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.27□□□□□ -0.45
GFRA1P56159 RN7SL725P-201ENST00000606439 259 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 AC006158.1-201ENST00000610661 249 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.27□□□□□ -0.45
GFRA1P56159 AQP7P3-201ENST00000624547 1041 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.27□□□□□ -0.45
GFRA1P56159 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.27□□□□□ -0.45
GFRA1P56159 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
GFRA1P56159 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.27□□□□□ -0.45
GFRA1P56159 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
GFRA1P56159 AC005252.3-201ENST00000623855 2258 ntBASIC12.27□□□□□ -0.45
GFRA1P56159 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.27□□□□□ -0.45
GFRA1P56159 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
GFRA1P56159 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.27□□□□□ -0.45
GFRA1P56159 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
GFRA1P56159 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GFRA1P56159 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 AC005014.1-201ENST00000432006 2976 ntBASIC12.26□□□□□ -0.45
GFRA1P56159 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 RHOC-205ENST00000369636 786 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.26□□□□□ -0.45
GFRA1P56159 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.26□□□□□ -0.45
GFRA1P56159 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 BPIFB5P-201ENST00000457066 1099 ntBASIC12.26□□□□□ -0.45
GFRA1P56159 RN7SL494P-201ENST00000461517 304 ntBASIC12.26□□□□□ -0.45
GFRA1P56159 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC12.26□□□□□ -0.45
GFRA1P56159 PIGCP1-201ENST00000527583 895 ntBASIC12.26□□□□□ -0.45
GFRA1P56159 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.26□□□□□ -0.45
GFRA1P56159 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 AC006483.2-201ENST00000609813 515 ntBASIC12.26□□□□□ -0.45
GFRA1P56159 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.26□□□□□ -0.45
GFRA1P56159 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC12.26□□□□□ -0.45
GFRA1P56159 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.26□□□□□ -0.45
GFRA1P56159 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GFRA1P56159 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.26□□□□□ -0.45
GFRA1P56159 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms