Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.15■□□□□ 0.02
GPC3P51654 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 AC079250.1-201ENST00000456046 531 ntBASIC15.15■□□□□ 0.02
GPC3P51654 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.15■□□□□ 0.02
GPC3P51654 BAK1P2-201ENST00000532665 631 ntBASIC15.15■□□□□ 0.02
GPC3P51654 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.15■□□□□ 0.02
GPC3P51654 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.15■□□□□ 0.02
GPC3P51654 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 AP005264.6-204ENST00000588436 719 ntBASIC15.15■□□□□ 0.02
GPC3P51654 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.15■□□□□ 0.02
GPC3P51654 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.15■□□□□ 0.02
GPC3P51654 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.15■□□□□ 0.02
GPC3P51654 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.15■□□□□ 0.02
GPC3P51654 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.15■□□□□ 0.02
GPC3P51654 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 AC009474.1-201ENST00000455096 1565 ntBASIC15.15■□□□□ 0.02
GPC3P51654 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
GPC3P51654 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC3P51654 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.02
GPC3P51654 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GPC3P51654 RCC2P5-201ENST00000492126 1487 ntBASIC15.14■□□□□ 0.01
GPC3P51654 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.14■□□□□ 0.01
GPC3P51654 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GPC3P51654 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC15.14■□□□□ 0.01
GPC3P51654 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.14■□□□□ 0.01
GPC3P51654 BPIFB5P-201ENST00000457066 1099 ntBASIC15.14■□□□□ 0.01
GPC3P51654 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.14■□□□□ 0.01
GPC3P51654 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 AC055811.3-201ENST00000584952 686 ntBASIC15.14■□□□□ 0.01
GPC3P51654 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
GPC3P51654 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.14■□□□□ 0.01
GPC3P51654 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.14■□□□□ 0.01
GPC3P51654 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
GPC3P51654 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 AC073869.1-201ENST00000415574 2762 ntBASIC15.14■□□□□ 0.01
GPC3P51654 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 AGAP12P-201ENST00000585227 2359 ntBASIC15.14■□□□□ 0.01
GPC3P51654 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GPC3P51654 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.14■□□□□ 0.01
GPC3P51654 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GPC3P51654 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.14■□□□□ 0.01
GPC3P51654 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
GPC3P51654 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
GPC3P51654 AC020763.3-201ENST00000625095 2904 ntBASIC15.13■□□□□ 0.01
GPC3P51654 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.13■□□□□ 0.01
GPC3P51654 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC15.13■□□□□ 0.01
GPC3P51654 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GPC3P51654 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GPC3P51654 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
GPC3P51654 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GPC3P51654 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GPC3P51654 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms