Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC11.85□□□□□ -0.51
CD40P25942 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC11.85□□□□□ -0.51
CD40P25942 AQP7P5-201ENST00000428759 1049 ntBASIC11.85□□□□□ -0.51
CD40P25942 PSMD4P1-201ENST00000433951 1109 ntBASIC11.85□□□□□ -0.51
CD40P25942 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC11.85□□□□□ -0.51
CD40P25942 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC11.85□□□□□ -0.51
CD40P25942 AQP7P4-201ENST00000447083 1042 ntBASIC11.85□□□□□ -0.51
CD40P25942 AC005077.3-201ENST00000449614 213 ntBASIC11.85□□□□□ -0.51
CD40P25942 AL135901.1-201ENST00000451812 333 ntBASIC11.85□□□□□ -0.51
CD40P25942 AQP7P2-201ENST00000453967 1041 ntBASIC11.85□□□□□ -0.51
CD40P25942 RN7SL494P-201ENST00000461517 304 ntBASIC11.85□□□□□ -0.51
CD40P25942 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC11.85□□□□□ -0.51
CD40P25942 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC11.85□□□□□ -0.51
CD40P25942 USB1-205ENST00000561743 1135 ntTSL 3 BASIC11.85□□□□□ -0.51
CD40P25942 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
CD40P25942 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC11.85□□□□□ -0.51
CD40P25942 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC11.85□□□□□ -0.51
CD40P25942 AC006483.2-201ENST00000609813 515 ntBASIC11.85□□□□□ -0.51
CD40P25942 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC11.85□□□□□ -0.51
CD40P25942 AQP7P3-201ENST00000624547 1041 ntBASIC11.85□□□□□ -0.51
CD40P25942 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CD40P25942 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CD40P25942 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 SNX18-202ENST00000343017 3140 ntBASIC11.85□□□□□ -0.51
CD40P25942 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.85□□□□□ -0.51
CD40P25942 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.84□□□□□ -0.51
CD40P25942 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.84□□□□□ -0.51
CD40P25942 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.84□□□□□ -0.51
CD40P25942 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 RPL10-203ENST00000406022 748 ntTSL 3 BASIC11.84□□□□□ -0.51
CD40P25942 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 BPIFB5P-201ENST00000457066 1099 ntBASIC11.84□□□□□ -0.51
CD40P25942 AC104212.2-201ENST00000478813 628 ntBASIC11.84□□□□□ -0.51
CD40P25942 AC120057.1-201ENST00000483947 663 ntBASIC11.84□□□□□ -0.51
CD40P25942 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 TREHP1-201ENST00000531328 465 ntBASIC11.84□□□□□ -0.51
CD40P25942 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC11.84□□□□□ -0.51
CD40P25942 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC11.84□□□□□ -0.51
CD40P25942 AC132812.1-201ENST00000583145 892 ntBASIC11.84□□□□□ -0.51
CD40P25942 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CD40P25942 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CD40P25942 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC11.84□□□□□ -0.51
CD40P25942 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 AC002472.4-201ENST00000641915 272 ntBASIC11.84□□□□□ -0.51
CD40P25942 AC020917.4-201ENST00000623994 1999 ntBASIC11.84□□□□□ -0.51
CD40P25942 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms