Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
COL8A2P25067 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
COL8A2P25067 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC11.64□□□□□ -0.55
COL8A2P25067 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 RN7SL396P-201ENST00000471086 295 ntBASIC11.64□□□□□ -0.55
COL8A2P25067 AC008026.2-201ENST00000495438 348 ntBASIC11.64□□□□□ -0.55
COL8A2P25067 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC11.64□□□□□ -0.55
COL8A2P25067 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC11.64□□□□□ -0.55
COL8A2P25067 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 AC013553.1-201ENST00000560906 267 ntBASIC11.64□□□□□ -0.55
COL8A2P25067 COX5A-205ENST00000568517 582 ntTSL 3 BASIC11.64□□□□□ -0.55
COL8A2P25067 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 AC010976.2-201ENST00000609697 852 ntBASIC11.64□□□□□ -0.55
COL8A2P25067 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC11.64□□□□□ -0.55
COL8A2P25067 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC11.64□□□□□ -0.55
COL8A2P25067 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.64□□□□□ -0.55
COL8A2P25067 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
COL8A2P25067 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
COL8A2P25067 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
COL8A2P25067 AL118506.1-201ENST00000601296 3082 ntBASIC11.63□□□□□ -0.55
COL8A2P25067 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.63□□□□□ -0.55
COL8A2P25067 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 AC073869.1-201ENST00000415574 2762 ntBASIC11.63□□□□□ -0.55
COL8A2P25067 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.63□□□□□ -0.55
COL8A2P25067 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
COL8A2P25067 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC11.63□□□□□ -0.55
COL8A2P25067 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
COL8A2P25067 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
COL8A2P25067 AP000354.1-201ENST00000396982 456 ntBASIC11.63□□□□□ -0.55
COL8A2P25067 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC11.63□□□□□ -0.55
COL8A2P25067 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
COL8A2P25067 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 AC007279.1-201ENST00000448547 837 ntBASIC11.63□□□□□ -0.55
COL8A2P25067 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC11.63□□□□□ -0.55
COL8A2P25067 AL157792.1-201ENST00000488281 530 ntBASIC11.63□□□□□ -0.55
COL8A2P25067 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC11.63□□□□□ -0.55
COL8A2P25067 AREG-202ENST00000502307 956 ntTSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 AC026410.1-201ENST00000507366 1101 ntBASIC11.63□□□□□ -0.55
COL8A2P25067 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 MT3-202ENST00000561640 514 ntTSL 3 BASIC11.63□□□□□ -0.55
COL8A2P25067 C2orf69P1-201ENST00000563532 1093 ntBASIC11.63□□□□□ -0.55
COL8A2P25067 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC11.63□□□□□ -0.55
COL8A2P25067 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC11.63□□□□□ -0.55
COL8A2P25067 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
COL8A2P25067 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 NAMA-206ENST00000605377 509 ntTSL 5 BASIC11.63□□□□□ -0.55
COL8A2P25067 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 Z98885.3-201ENST00000624882 1757 ntBASIC11.63□□□□□ -0.55
COL8A2P25067 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.63□□□□□ -0.55
COL8A2P25067 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
COL8A2P25067 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms