Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PI4KAP2-201ENST00000360806 2080 ntBASIC14.16□□□□□ -0.14
ERCC2P18074 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.16□□□□□ -0.14
ERCC2P18074 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.16□□□□□ -0.14
ERCC2P18074 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ERCC2P18074 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.16□□□□□ -0.14
ERCC2P18074 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ERCC2P18074 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.16□□□□□ -0.14
ERCC2P18074 FGFR3P1-201ENST00000449999 601 ntBASIC14.16□□□□□ -0.14
ERCC2P18074 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.16□□□□□ -0.14
ERCC2P18074 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.16□□□□□ -0.14
ERCC2P18074 AC130709.1-201ENST00000484779 1212 ntBASIC14.16□□□□□ -0.14
ERCC2P18074 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.16□□□□□ -0.14
ERCC2P18074 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
ERCC2P18074 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.16□□□□□ -0.14
ERCC2P18074 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.16□□□□□ -0.14
ERCC2P18074 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.16□□□□□ -0.14
ERCC2P18074 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ERCC2P18074 AC106872.11-201ENST00000605838 421 ntBASIC14.16□□□□□ -0.14
ERCC2P18074 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.16□□□□□ -0.14
ERCC2P18074 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.16□□□□□ -0.14
ERCC2P18074 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
ERCC2P18074 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.16□□□□□ -0.14
ERCC2P18074 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.16□□□□□ -0.14
ERCC2P18074 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.16□□□□□ -0.14
ERCC2P18074 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
ERCC2P18074 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ERCC2P18074 AC005252.3-201ENST00000623855 2258 ntBASIC14.16□□□□□ -0.14
ERCC2P18074 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 AC074138.1-201ENST00000611182 1303 ntBASIC14.15□□□□□ -0.14
ERCC2P18074 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ERCC2P18074 TUBB2BP1-201ENST00000404155 871 ntBASIC14.15□□□□□ -0.14
ERCC2P18074 RN7SKP109-201ENST00000410592 316 ntBASIC14.15□□□□□ -0.14
ERCC2P18074 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.15□□□□□ -0.14
ERCC2P18074 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 RN7SL375P-201ENST00000492442 298 ntBASIC14.15□□□□□ -0.14
ERCC2P18074 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.15□□□□□ -0.14
ERCC2P18074 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 AC087392.5-201ENST00000612517 489 ntBASIC14.15□□□□□ -0.14
ERCC2P18074 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.15□□□□□ -0.14
ERCC2P18074 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.15□□□□□ -0.14
ERCC2P18074 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ERCC2P18074 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ERCC2P18074 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.15□□□□□ -0.15
ERCC2P18074 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ERCC2P18074 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ERCC2P18074 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.14□□□□□ -0.15
ERCC2P18074 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ERCC2P18074 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ERCC2P18074 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms