Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ACANP16112 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.08□□□□□ -0.64
ACANP16112 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.08□□□□□ -0.64
ACANP16112 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.08□□□□□ -0.64
ACANP16112 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.08□□□□□ -0.64
ACANP16112 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
ACANP16112 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ACANP16112 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ACANP16112 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ACANP16112 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.08□□□□□ -0.64
ACANP16112 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ACANP16112 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 HNRNPA1P68-201ENST00000425806 979 ntBASIC11.07□□□□□ -0.64
ACANP16112 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC11.07□□□□□ -0.64
ACANP16112 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC11.07□□□□□ -0.64
ACANP16112 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC11.07□□□□□ -0.64
ACANP16112 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC11.07□□□□□ -0.64
ACANP16112 IGHV1OR16-3-201ENST00000568138 205 ntBASIC11.07□□□□□ -0.64
ACANP16112 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC11.07□□□□□ -0.64
ACANP16112 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC11.07□□□□□ -0.64
ACANP16112 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 AC073592.10-201ENST00000624789 597 ntBASIC11.07□□□□□ -0.64
ACANP16112 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 USP39-207ENST00000450066 2086 ntTSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 AC245140.2-201ENST00000624054 1939 ntBASIC11.07□□□□□ -0.64
ACANP16112 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 CDC20P1-201ENST00000488829 1500 ntBASIC11.07□□□□□ -0.64
ACANP16112 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ACANP16112 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
ACANP16112 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC11.07□□□□□ -0.64
ACANP16112 AC116036.2-201ENST00000607592 462 ntBASIC11.07□□□□□ -0.64
ACANP16112 AC010601.2-201ENST00000623060 774 ntBASIC11.07□□□□□ -0.64
ACANP16112 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
ACANP16112 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ACANP16112 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
ACANP16112 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ACANP16112 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
ACANP16112 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
ACANP16112 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ACANP16112 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ACANP16112 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ACANP16112 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ACANP16112 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
ACANP16112 MIR1249-201ENST00000408671 66 ntBASIC11.06□□□□□ -0.64
ACANP16112 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC11.06□□□□□ -0.64
ACANP16112 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC11.06□□□□□ -0.64
ACANP16112 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC11.06□□□□□ -0.64
ACANP16112 JPT1-205ENST00000470924 663 ntTSL 5 BASIC11.06□□□□□ -0.64
ACANP16112 MTND6P4-201ENST00000506002 522 ntBASIC11.06□□□□□ -0.64
ACANP16112 HNRNPA1P7-201ENST00000521273 963 ntBASIC11.06□□□□□ -0.64
ACANP16112 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC11.06□□□□□ -0.64
ACANP16112 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
ACANP16112 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms