Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
APOA4P06727 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 AC073869.2-201ENST00000417338 1026 ntBASIC13.86□□□□□ -0.19
APOA4P06727 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA4P06727 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA4P06727 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA4P06727 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA4P06727 RN7SL258P-201ENST00000478664 300 ntBASIC13.86□□□□□ -0.19
APOA4P06727 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA4P06727 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA4P06727 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
APOA4P06727 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA4P06727 PHBP15-201ENST00000574228 665 ntBASIC13.86□□□□□ -0.19
APOA4P06727 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA4P06727 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 AL109837.1-201ENST00000603272 613 ntBASIC13.86□□□□□ -0.19
APOA4P06727 AL021707.6-201ENST00000609212 491 ntBASIC13.86□□□□□ -0.19
APOA4P06727 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA4P06727 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA4P06727 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOA4P06727 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOA4P06727 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
APOA4P06727 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA4P06727 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
APOA4P06727 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
APOA4P06727 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOA4P06727 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA4P06727 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA4P06727 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.85□□□□□ -0.19
APOA4P06727 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 AC104758.3-203ENST00000562938 2123 ntBASIC13.85□□□□□ -0.19
APOA4P06727 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 AC067931.2-201ENST00000623655 2003 ntBASIC13.85□□□□□ -0.19
APOA4P06727 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.85□□□□□ -0.19
APOA4P06727 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.85□□□□□ -0.19
APOA4P06727 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 AC026320.2-201ENST00000434379 478 ntBASIC13.85□□□□□ -0.19
APOA4P06727 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 AL133466.1-201ENST00000447582 150 ntBASIC13.85□□□□□ -0.19
APOA4P06727 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
APOA4P06727 SLC25A15P3-201ENST00000505530 290 ntBASIC13.85□□□□□ -0.19
APOA4P06727 AC114947.1-202ENST00000514136 344 ntBASIC13.85□□□□□ -0.19
APOA4P06727 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.85□□□□□ -0.19
APOA4P06727 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.85□□□□□ -0.19
APOA4P06727 RN7SL455P-201ENST00000580629 282 ntBASIC13.85□□□□□ -0.19
APOA4P06727 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 REXO1L1P-201ENST00000379010 6598 ntBASIC13.85□□□□□ -0.19
APOA4P06727 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
APOA4P06727 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA4P06727 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 AC004554.1-201ENST00000422830 1468 ntBASIC13.85□□□□□ -0.19
APOA4P06727 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA4P06727 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms