Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
HLA-AP01891 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HLA-AP01891 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
HLA-AP01891 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
HLA-AP01891 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.69□□□□□ -0.54
HLA-AP01891 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.69□□□□□ -0.54
HLA-AP01891 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 TTTY23B-201ENST00000442790 549 ntBASIC11.69□□□□□ -0.54
HLA-AP01891 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-AP01891 AC022137.2-201ENST00000503482 481 ntBASIC11.69□□□□□ -0.54
HLA-AP01891 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 PTP4A1P2-201ENST00000546033 454 ntBASIC11.69□□□□□ -0.54
HLA-AP01891 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.69□□□□□ -0.54
HLA-AP01891 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.69□□□□□ -0.54
HLA-AP01891 RN7SL48P-201ENST00000579283 293 ntBASIC11.69□□□□□ -0.54
HLA-AP01891 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
HLA-AP01891 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
HLA-AP01891 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 IGHV3-72-202ENST00000621503 303 ntBASIC11.69□□□□□ -0.54
HLA-AP01891 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
HLA-AP01891 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.69□□□□□ -0.54
HLA-AP01891 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-AP01891 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-AP01891 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
HLA-AP01891 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-AP01891 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-AP01891 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 FLJ30679-201ENST00000624773 1980 ntBASIC11.68□□□□□ -0.54
HLA-AP01891 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.68□□□□□ -0.54
HLA-AP01891 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.68□□□□□ -0.54
HLA-AP01891 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
HLA-AP01891 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.68□□□□□ -0.54
HLA-AP01891 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
HLA-AP01891 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
HLA-AP01891 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
HLA-AP01891 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC11.68□□□□□ -0.54
HLA-AP01891 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
HLA-AP01891 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.68□□□□□ -0.54
HLA-AP01891 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
HLA-AP01891 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
HLA-AP01891 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-AP01891 BAATP1-201ENST00000412284 1225 ntBASIC11.68□□□□□ -0.54
HLA-AP01891 COX5BP8-201ENST00000416911 349 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms