Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 AC092068.2-201ENST00000590491 1708 ntBASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COMMD3-BMI1R4GMX3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 AC026202.3-201ENST00000600805 1127 ntBASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD3-BMI1R4GMX3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 AC007952.6-201ENST00000573168 2673 ntBASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 AC003957.1-201ENST00000625108 2673 ntBASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.85■□□□□ 0.93
COMMD3-BMI1R4GMX3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.84■□□□□ 0.93
COMMD3-BMI1R4GMX3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD3-BMI1R4GMX3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
COMMD3-BMI1R4GMX3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD3-BMI1R4GMX3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD3-BMI1R4GMX3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD3-BMI1R4GMX3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD3-BMI1R4GMX3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.84■□□□□ 0.93
COMMD3-BMI1R4GMX3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD3-BMI1R4GMX3 AC026310.3-201ENST00000625186 2373 ntBASIC20.83■□□□□ 0.93
COMMD3-BMI1R4GMX3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
COMMD3-BMI1R4GMX3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COMMD3-BMI1R4GMX3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.83■□□□□ 0.93
COMMD3-BMI1R4GMX3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COMMD3-BMI1R4GMX3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COMMD3-BMI1R4GMX3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COMMD3-BMI1R4GMX3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
COMMD3-BMI1R4GMX3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.83■□□□□ 0.92
COMMD3-BMI1R4GMX3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
COMMD3-BMI1R4GMX3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD3-BMI1R4GMX3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 C11orf96-202ENST00000528572 1834 ntBASIC20.81■□□□□ 0.92
COMMD3-BMI1R4GMX3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COMMD3-BMI1R4GMX3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
COMMD3-BMI1R4GMX3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.79■□□□□ 0.92
COMMD3-BMI1R4GMX3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.79■□□□□ 0.92
COMMD3-BMI1R4GMX3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD3-BMI1R4GMX3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms