Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAI2Q9Y5P3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.56■■□□□ 1.2
RAI2Q9Y5P3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAI2Q9Y5P3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RAI2Q9Y5P3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 DUX4L4-201ENST00000566884 1269 ntBASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 AC009086.3-201ENST00000623486 1008 ntBASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
RAI2Q9Y5P3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 AC006455.2-201ENST00000429931 906 ntBASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAI2Q9Y5P3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 AC092171.4-201ENST00000609130 632 ntBASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.53■■□□□ 1.2
RAI2Q9Y5P3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 DUSP8P5-201ENST00000422884 1815 ntBASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAI2Q9Y5P3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.52■■□□□ 1.19
RAI2Q9Y5P3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 DUSP8P3-201ENST00000399571 1760 ntBASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.51■■□□□ 1.19
RAI2Q9Y5P3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 AC135279.3-201ENST00000610945 1311 ntBASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.5■■□□□ 1.19
RAI2Q9Y5P3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAI2Q9Y5P3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.49■■□□□ 1.19
RAI2Q9Y5P3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RAI2Q9Y5P3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
RAI2Q9Y5P3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.49■■□□□ 1.19
RAI2Q9Y5P3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RAI2Q9Y5P3 AC142381.2-201ENST00000566120 298 ntBASIC22.49■■□□□ 1.19
RAI2Q9Y5P3 SYT6-210ENST00000641643 1587 ntBASIC22.49■■□□□ 1.19
RAI2Q9Y5P3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAI2Q9Y5P3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms