Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 AC137767.1-201ENST00000602918 1920 ntBASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 AC239859.2-201ENST00000444165 318 ntBASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 AC092028.1-203ENST00000608262 953 ntBASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA9Q9Y5H5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 MIR4787-201ENST00000607364 84 ntBASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 MIR6722-201ENST00000617286 78 ntBASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHA9Q9Y5H5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA9Q9Y5H5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA9Q9Y5H5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA9Q9Y5H5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHA9Q9Y5H5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA9Q9Y5H5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
PCDHA9Q9Y5H5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHA9Q9Y5H5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDHA9Q9Y5H5 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.43■■□□□ 1.02
PCDHA9Q9Y5H5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHA9Q9Y5H5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms