Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LRCH1Q9Y2L9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.17■□□□□ 0.98
LRCH1Q9Y2L9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LRCH1Q9Y2L9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH1Q9Y2L9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
LRCH1Q9Y2L9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.15■□□□□ 0.98
LRCH1Q9Y2L9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
LRCH1Q9Y2L9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH1Q9Y2L9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH1Q9Y2L9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRCH1Q9Y2L9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LRCH1Q9Y2L9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRCH1Q9Y2L9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRCH1Q9Y2L9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRCH1Q9Y2L9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRCH1Q9Y2L9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRCH1Q9Y2L9 AC005229.4-201ENST00000610085 2198 ntBASIC21.14■□□□□ 0.97
LRCH1Q9Y2L9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.14■□□□□ 0.97
LRCH1Q9Y2L9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRCH1Q9Y2L9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 AC007952.6-201ENST00000573168 2673 ntBASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 AC003957.1-201ENST00000625108 2673 ntBASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRCH1Q9Y2L9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRCH1Q9Y2L9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRCH1Q9Y2L9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LRCH1Q9Y2L9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRCH1Q9Y2L9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LRCH1Q9Y2L9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRCH1Q9Y2L9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
LRCH1Q9Y2L9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRCH1Q9Y2L9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
LRCH1Q9Y2L9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRCH1Q9Y2L9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 LINC01521-201ENST00000504184 1943 ntBASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.1■□□□□ 0.97
LRCH1Q9Y2L9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms