Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX41Q9UJV9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX41Q9UJV9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
DDX41Q9UJV9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DDX41Q9UJV9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DDX41Q9UJV9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DDX41Q9UJV9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 AC006455.2-201ENST00000429931 906 ntBASIC25.58■■□□□ 1.69
DDX41Q9UJV9 AC105265.2-201ENST00000467189 838 ntBASIC25.58■■□□□ 1.69
DDX41Q9UJV9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.58■■□□□ 1.69
DDX41Q9UJV9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
DDX41Q9UJV9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX41Q9UJV9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
DDX41Q9UJV9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
DDX41Q9UJV9 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.57■■□□□ 1.68
DDX41Q9UJV9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX41Q9UJV9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX41Q9UJV9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
DDX41Q9UJV9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX41Q9UJV9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.56■■□□□ 1.68
DDX41Q9UJV9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX41Q9UJV9 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.56■■□□□ 1.68
DDX41Q9UJV9 AC091305.1-201ENST00000479476 895 ntBASIC25.56■■□□□ 1.68
DDX41Q9UJV9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX41Q9UJV9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.56■■□□□ 1.68
DDX41Q9UJV9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.56■■□□□ 1.68
DDX41Q9UJV9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX41Q9UJV9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX41Q9UJV9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX41Q9UJV9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX41Q9UJV9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX41Q9UJV9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX41Q9UJV9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
DDX41Q9UJV9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX41Q9UJV9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX41Q9UJV9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.54■■□□□ 1.68
DDX41Q9UJV9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.54■■□□□ 1.68
DDX41Q9UJV9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
DDX41Q9UJV9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX41Q9UJV9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
DDX41Q9UJV9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
DDX41Q9UJV9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 RARRES2P6-201ENST00000567333 442 ntBASIC25.53■■□□□ 1.68
DDX41Q9UJV9 MIR3181-201ENST00000578512 73 ntBASIC25.53■■□□□ 1.68
DDX41Q9UJV9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 AC136469.2-201ENST00000623944 1028 ntBASIC25.53■■□□□ 1.68
DDX41Q9UJV9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 RASA4CP-201ENST00000424092 1398 ntBASIC25.53■■□□□ 1.68
DDX41Q9UJV9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX41Q9UJV9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 CA15P2-201ENST00000611168 834 ntBASIC25.52■■□□□ 1.68
DDX41Q9UJV9 AC009086.3-201ENST00000623486 1008 ntBASIC25.52■■□□□ 1.68
DDX41Q9UJV9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX41Q9UJV9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
DDX41Q9UJV9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.51■■□□□ 1.67
DDX41Q9UJV9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX41Q9UJV9 AC026271.2-201ENST00000428091 497 ntBASIC25.51■■□□□ 1.67
DDX41Q9UJV9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.51■■□□□ 1.67
DDX41Q9UJV9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
DDX41Q9UJV9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.5■■□□□ 1.67
DDX41Q9UJV9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms