Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN1Q9P244 LINC01529-204ENST00000636474 1715 ntBASIC20.5■□□□□ 0.87
LRFN1Q9P244 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN1Q9P244 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN1Q9P244 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN1Q9P244 IRS3P-201ENST00000223076 1006 ntBASIC20.49■□□□□ 0.87
LRFN1Q9P244 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN1Q9P244 AL499627.2-201ENST00000606283 725 ntBASIC20.49■□□□□ 0.87
LRFN1Q9P244 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.49■□□□□ 0.87
LRFN1Q9P244 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN1Q9P244 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN1Q9P244 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.48■□□□□ 0.87
LRFN1Q9P244 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.48■□□□□ 0.87
LRFN1Q9P244 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN1Q9P244 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN1Q9P244 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.48■□□□□ 0.87
LRFN1Q9P244 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN1Q9P244 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN1Q9P244 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN1Q9P244 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN1Q9P244 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN1Q9P244 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN1Q9P244 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.47■□□□□ 0.87
LRFN1Q9P244 SLC47A1P1-202ENST00000449666 945 ntBASIC20.47■□□□□ 0.87
LRFN1Q9P244 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.47■□□□□ 0.87
LRFN1Q9P244 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN1Q9P244 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.47■□□□□ 0.87
LRFN1Q9P244 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
LRFN1Q9P244 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN1Q9P244 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN1Q9P244 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.47■□□□□ 0.87
LRFN1Q9P244 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRFN1Q9P244 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
LRFN1Q9P244 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.46■□□□□ 0.87
LRFN1Q9P244 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRFN1Q9P244 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRFN1Q9P244 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
LRFN1Q9P244 AC026271.2-201ENST00000428091 497 ntBASIC20.46■□□□□ 0.87
LRFN1Q9P244 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LRFN1Q9P244 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.46■□□□□ 0.87
LRFN1Q9P244 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.46■□□□□ 0.87
LRFN1Q9P244 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRFN1Q9P244 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LRFN1Q9P244 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN1Q9P244 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.45■□□□□ 0.86
LRFN1Q9P244 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LRFN1Q9P244 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.45■□□□□ 0.86
LRFN1Q9P244 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.45■□□□□ 0.86
LRFN1Q9P244 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN1Q9P244 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
LRFN1Q9P244 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.45■□□□□ 0.86
LRFN1Q9P244 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.45■□□□□ 0.86
LRFN1Q9P244 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN1Q9P244 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN1Q9P244 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN1Q9P244 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.44■□□□□ 0.86
LRFN1Q9P244 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.44■□□□□ 0.86
LRFN1Q9P244 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
LRFN1Q9P244 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LRFN1Q9P244 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.44■□□□□ 0.86
LRFN1Q9P244 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN1Q9P244 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.44■□□□□ 0.86
LRFN1Q9P244 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LRFN1Q9P244 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN1Q9P244 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN1Q9P244 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN1Q9P244 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN1Q9P244 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN1Q9P244 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.43■□□□□ 0.86
LRFN1Q9P244 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LRFN1Q9P244 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN1Q9P244 ABCB10P4-201ENST00000566803 2184 ntBASIC20.43■□□□□ 0.86
LRFN1Q9P244 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN1Q9P244 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN1Q9P244 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.42■□□□□ 0.86
LRFN1Q9P244 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LRFN1Q9P244 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRFN1Q9P244 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.42■□□□□ 0.86
LRFN1Q9P244 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRFN1Q9P244 MIR5787-201ENST00000611784 55 ntBASIC20.42■□□□□ 0.86
LRFN1Q9P244 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.42■□□□□ 0.86
LRFN1Q9P244 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRFN1Q9P244 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRFN1Q9P244 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.41■□□□□ 0.86
LRFN1Q9P244 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN1Q9P244 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN1Q9P244 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN1Q9P244 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LRFN1Q9P244 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms