Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 AL499627.2-201ENST00000606283 725 ntBASIC28.68■■■□□ 2.18
TFCP2L1Q9NZI6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.68■■■□□ 2.18
TFCP2L1Q9NZI6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC28.68■■■□□ 2.18
TFCP2L1Q9NZI6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TFCP2L1Q9NZI6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.66■■■□□ 2.18
TFCP2L1Q9NZI6 AP004607.4-201ENST00000530158 1459 ntBASIC28.65■■■□□ 2.18
TFCP2L1Q9NZI6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
TFCP2L1Q9NZI6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TFCP2L1Q9NZI6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TFCP2L1Q9NZI6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.64■■■□□ 2.18
TFCP2L1Q9NZI6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TFCP2L1Q9NZI6 TSPY20P-201ENST00000450910 630 ntBASIC28.64■■■□□ 2.18
TFCP2L1Q9NZI6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC28.64■■■□□ 2.18
TFCP2L1Q9NZI6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.64■■■□□ 2.18
TFCP2L1Q9NZI6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.64■■■□□ 2.18
TFCP2L1Q9NZI6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.64■■■□□ 2.17
TFCP2L1Q9NZI6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 AL161729.1-201ENST00000604104 1402 ntBASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 AC004854.2-201ENST00000608450 1441 ntBASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 ALDH1A3-203ENST00000557963 1670 ntBASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TFCP2L1Q9NZI6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
TFCP2L1Q9NZI6 AC092803.2-201ENST00000564287 1899 ntBASIC28.62■■■□□ 2.17
TFCP2L1Q9NZI6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TFCP2L1Q9NZI6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
TFCP2L1Q9NZI6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TFCP2L1Q9NZI6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TFCP2L1Q9NZI6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
TFCP2L1Q9NZI6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
TFCP2L1Q9NZI6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TFCP2L1Q9NZI6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 GPX1P1-201ENST00000388829 606 ntBASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TFCP2L1Q9NZI6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 MIR663A-201ENST00000385250 93 ntBASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 TPRG1LP1-201ENST00000598702 760 ntBASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TFCP2L1Q9NZI6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TFCP2L1Q9NZI6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TFCP2L1Q9NZI6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TFCP2L1Q9NZI6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.58■■■□□ 2.17
TFCP2L1Q9NZI6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TFCP2L1Q9NZI6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms