Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
SLC52A1Q9NWF4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SLC52A1Q9NWF4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SLC52A1Q9NWF4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC32.47■■■□□ 2.79
SLC52A1Q9NWF4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SLC52A1Q9NWF4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SLC52A1Q9NWF4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SLC52A1Q9NWF4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC32.47■■■□□ 2.79
SLC52A1Q9NWF4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC32.47■■■□□ 2.79
SLC52A1Q9NWF4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
SLC52A1Q9NWF4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 AC006015.1-201ENST00000429970 570 ntBASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 AC105233.4-201ENST00000642045 216 ntBASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC32.45■■■□□ 2.79
SLC52A1Q9NWF4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
SLC52A1Q9NWF4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
SLC52A1Q9NWF4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SLC52A1Q9NWF4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SLC52A1Q9NWF4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC32.44■■■□□ 2.78
SLC52A1Q9NWF4 KRT18P61-201ENST00000585825 1298 ntBASIC32.44■■■□□ 2.78
SLC52A1Q9NWF4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
SLC52A1Q9NWF4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SLC52A1Q9NWF4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SLC52A1Q9NWF4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC32.43■■■□□ 2.78
SLC52A1Q9NWF4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SLC52A1Q9NWF4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
SLC52A1Q9NWF4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SLC52A1Q9NWF4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC32.42■■■□□ 2.78
SLC52A1Q9NWF4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
SLC52A1Q9NWF4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC32.42■■■□□ 2.78
SLC52A1Q9NWF4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC32.42■■■□□ 2.78
SLC52A1Q9NWF4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SLC52A1Q9NWF4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SLC52A1Q9NWF4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC32.41■■■□□ 2.78
SLC52A1Q9NWF4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC32.41■■■□□ 2.78
SLC52A1Q9NWF4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC32.41■■■□□ 2.78
SLC52A1Q9NWF4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC32.41■■■□□ 2.78
SLC52A1Q9NWF4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC32.41■■■□□ 2.78
SLC52A1Q9NWF4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
SLC52A1Q9NWF4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC32.41■■■□□ 2.78
SLC52A1Q9NWF4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 HLA-L-209ENST00000420110 1011 ntBASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 RAP2CP1-201ENST00000605103 478 ntBASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC32.4■■■□□ 2.78
SLC52A1Q9NWF4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC32.39■■■□□ 2.78
SLC52A1Q9NWF4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
SLC52A1Q9NWF4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SLC52A1Q9NWF4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SLC52A1Q9NWF4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SLC52A1Q9NWF4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SLC52A1Q9NWF4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SLC52A1Q9NWF4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SLC52A1Q9NWF4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SLC52A1Q9NWF4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
SLC52A1Q9NWF4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC32.38■■■□□ 2.77
SLC52A1Q9NWF4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 AC144652.1-201ENST00000609974 1624 ntBASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 AC080038.1-201ENST00000611274 1154 ntBASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 LINC01529-204ENST00000636474 1715 ntBASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 AP003733.4-201ENST00000623785 1697 ntBASIC32.37■■■□□ 2.77
SLC52A1Q9NWF4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
SLC52A1Q9NWF4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC32.36■■■□□ 2.77
SLC52A1Q9NWF4 TPRG1LP1-201ENST00000598702 760 ntBASIC32.36■■■□□ 2.77
SLC52A1Q9NWF4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SLC52A1Q9NWF4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
SLC52A1Q9NWF4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SLC52A1Q9NWF4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms