Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CHD8Q9HCK8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.18■□□□□ 0.98
CHD8Q9HCK8 AC211429.1-201ENST00000415277 523 ntBASIC21.17■□□□□ 0.98
CHD8Q9HCK8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 AC008550.1-201ENST00000511500 884 ntBASIC21.17■□□□□ 0.98
CHD8Q9HCK8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD8Q9HCK8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD8Q9HCK8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD8Q9HCK8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD8Q9HCK8 DUX4L16-201ENST00000555130 1264 ntBASIC21.16■□□□□ 0.98
CHD8Q9HCK8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD8Q9HCK8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHD8Q9HCK8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD8Q9HCK8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD8Q9HCK8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD8Q9HCK8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD8Q9HCK8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CHD8Q9HCK8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
CHD8Q9HCK8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.14■□□□□ 0.98
CHD8Q9HCK8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.14■□□□□ 0.98
CHD8Q9HCK8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD8Q9HCK8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD8Q9HCK8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.14■□□□□ 0.97
CHD8Q9HCK8 AC010525.1-201ENST00000585559 441 ntBASIC21.14■□□□□ 0.97
CHD8Q9HCK8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD8Q9HCK8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD8Q9HCK8 AL158047.1-201ENST00000445918 881 ntBASIC21.13■□□□□ 0.97
CHD8Q9HCK8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD8Q9HCK8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD8Q9HCK8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD8Q9HCK8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD8Q9HCK8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CHD8Q9HCK8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHD8Q9HCK8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 AC006058.3-201ENST00000606217 1069 ntBASIC21.12■□□□□ 0.97
CHD8Q9HCK8 AC105233.4-201ENST00000642045 216 ntBASIC21.12■□□□□ 0.97
CHD8Q9HCK8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD8Q9HCK8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHD8Q9HCK8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD8Q9HCK8 AC133041.1-202ENST00000642053 222 ntBASIC21.11■□□□□ 0.97
CHD8Q9HCK8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD8Q9HCK8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHD8Q9HCK8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD8Q9HCK8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.11■□□□□ 0.97
CHD8Q9HCK8 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.11■□□□□ 0.97
CHD8Q9HCK8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.11■□□□□ 0.97
CHD8Q9HCK8 AC133637.1-201ENST00000624115 1537 ntBASIC21.1■□□□□ 0.97
CHD8Q9HCK8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CHD8Q9HCK8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms