Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.92■■□□□ 1.9
CWC22Q9HCG8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CWC22Q9HCG8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CWC22Q9HCG8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CWC22Q9HCG8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.91■■□□□ 1.9
CWC22Q9HCG8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CWC22Q9HCG8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CWC22Q9HCG8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CWC22Q9HCG8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CWC22Q9HCG8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.91■■□□□ 1.9
CWC22Q9HCG8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.91■■□□□ 1.9
CWC22Q9HCG8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CWC22Q9HCG8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CWC22Q9HCG8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CWC22Q9HCG8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CWC22Q9HCG8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.9■■□□□ 1.9
CWC22Q9HCG8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CWC22Q9HCG8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.9■■□□□ 1.9
CWC22Q9HCG8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.9■■□□□ 1.9
CWC22Q9HCG8 AC142381.2-201ENST00000566120 298 ntBASIC26.9■■□□□ 1.9
CWC22Q9HCG8 SNX5-217ENST00000606557 1087 ntBASIC26.9■■□□□ 1.9
CWC22Q9HCG8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CWC22Q9HCG8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CWC22Q9HCG8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.89■■□□□ 1.9
CWC22Q9HCG8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CWC22Q9HCG8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CWC22Q9HCG8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.89■■□□□ 1.9
CWC22Q9HCG8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CWC22Q9HCG8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.89■■□□□ 1.9
CWC22Q9HCG8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CWC22Q9HCG8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.89■■□□□ 1.89
CWC22Q9HCG8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CWC22Q9HCG8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CWC22Q9HCG8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.88■■□□□ 1.89
CWC22Q9HCG8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CWC22Q9HCG8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.88■■□□□ 1.89
CWC22Q9HCG8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CWC22Q9HCG8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 AC106739.1-201ENST00000617035 715 ntBASIC26.87■■□□□ 1.89
CWC22Q9HCG8 MIR6722-201ENST00000617286 78 ntBASIC26.87■■□□□ 1.89
CWC22Q9HCG8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.87■■□□□ 1.89
CWC22Q9HCG8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 EP400NL-214ENST00000641289 2402 ntBASIC26.86■■□□□ 1.89
CWC22Q9HCG8 C1orf229-201ENST00000623686 2258 ntBASIC26.86■■□□□ 1.89
CWC22Q9HCG8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
CWC22Q9HCG8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.85■■□□□ 1.89
CWC22Q9HCG8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
CWC22Q9HCG8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 UNC93B3-201ENST00000308076 687 ntBASIC26.84■■□□□ 1.89
CWC22Q9HCG8 SRD5A1P1-201ENST00000442297 786 ntBASIC26.84■■□□□ 1.89
CWC22Q9HCG8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CWC22Q9HCG8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CWC22Q9HCG8 AL136162.1-201ENST00000607711 1078 ntBASIC26.83■■□□□ 1.89
CWC22Q9HCG8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.83■■□□□ 1.89
CWC22Q9HCG8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CWC22Q9HCG8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CWC22Q9HCG8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.83■■□□□ 1.88
CWC22Q9HCG8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
CWC22Q9HCG8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CWC22Q9HCG8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CWC22Q9HCG8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CWC22Q9HCG8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CWC22Q9HCG8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CWC22Q9HCG8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CWC22Q9HCG8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms