Protein–RNA interactions for Protein: Q9HCB6

SPON1, Spondin-1, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPON1Q9HCB6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPON1Q9HCB6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SPON1Q9HCB6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SPON1Q9HCB6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
SPON1Q9HCB6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
SPON1Q9HCB6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SPON1Q9HCB6 AC007322.1-201ENST00000426983 750 ntBASIC28.35■■■□□ 2.13
SPON1Q9HCB6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.35■■■□□ 2.13
SPON1Q9HCB6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
SPON1Q9HCB6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SPON1Q9HCB6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 AC098590.1-201ENST00000468126 897 ntBASIC28.34■■■□□ 2.13
SPON1Q9HCB6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.34■■■□□ 2.13
SPON1Q9HCB6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
SPON1Q9HCB6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SPON1Q9HCB6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
SPON1Q9HCB6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.33■■■□□ 2.13
SPON1Q9HCB6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.33■■■□□ 2.13
SPON1Q9HCB6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SPON1Q9HCB6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SPON1Q9HCB6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.12
SPON1Q9HCB6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SPON1Q9HCB6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.32■■■□□ 2.12
SPON1Q9HCB6 DUSP5P2-201ENST00000426873 1033 ntBASIC28.32■■■□□ 2.12
SPON1Q9HCB6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC28.32■■■□□ 2.12
SPON1Q9HCB6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
SPON1Q9HCB6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
SPON1Q9HCB6 MIR1224-201ENST00000408193 85 ntBASIC28.31■■■□□ 2.12
SPON1Q9HCB6 RPS2P4-201ENST00000476944 856 ntBASIC28.31■■■□□ 2.12
SPON1Q9HCB6 RNA5SP413-201ENST00000516373 109 ntBASIC28.31■■■□□ 2.12
SPON1Q9HCB6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPON1Q9HCB6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.31■■■□□ 2.12
SPON1Q9HCB6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPON1Q9HCB6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 AC098934.4-201ENST00000564127 592 ntBASIC28.3■■■□□ 2.12
SPON1Q9HCB6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SPON1Q9HCB6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 GCSHP5-201ENST00000443090 522 ntBASIC28.29■■■□□ 2.12
SPON1Q9HCB6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SPON1Q9HCB6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPON1Q9HCB6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
SPON1Q9HCB6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SPON1Q9HCB6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPON1Q9HCB6 DUX4L16-201ENST00000555130 1264 ntBASIC28.28■■■□□ 2.12
SPON1Q9HCB6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC28.28■■■□□ 2.12
SPON1Q9HCB6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.28■■■□□ 2.12
SPON1Q9HCB6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.27■■■□□ 2.12
SPON1Q9HCB6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC28.27■■■□□ 2.12
SPON1Q9HCB6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC28.27■■■□□ 2.12
SPON1Q9HCB6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.27■■■□□ 2.12
SPON1Q9HCB6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.27■■■□□ 2.12
SPON1Q9HCB6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
SPON1Q9HCB6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.26■■■□□ 2.11
SPON1Q9HCB6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SPON1Q9HCB6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SPON1Q9HCB6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC28.26■■■□□ 2.11
SPON1Q9HCB6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.26■■■□□ 2.11
SPON1Q9HCB6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SPON1Q9HCB6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SPON1Q9HCB6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
SPON1Q9HCB6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SPON1Q9HCB6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.25■■■□□ 2.11
SPON1Q9HCB6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.25■■■□□ 2.11
SPON1Q9HCB6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC28.25■■■□□ 2.11
SPON1Q9HCB6 BX005040.4-201ENST00000637145 1518 ntBASIC28.24■■■□□ 2.11
SPON1Q9HCB6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
SPON1Q9HCB6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SPON1Q9HCB6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SPON1Q9HCB6 AF201337.1-201ENST00000520239 748 ntBASIC28.24■■■□□ 2.11
SPON1Q9HCB6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms