Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.89□□□□□ -0.03
SND1-IT1Q9HBX3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 ESRRAP2-201ENST00000418437 1549 ntBASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 MIR639-201ENST00000384974 98 ntBASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 HES4-204ENST00000484667 667 ntTSL 3 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.88□□□□□ -0.03
SND1-IT1Q9HBX3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
SND1-IT1Q9HBX3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SND1-IT1Q9HBX3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SND1-IT1Q9HBX3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 MIR7108-201ENST00000614319 87 ntBASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SND1-IT1Q9HBX3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms