Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
SCAF1Q9H7N4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
SCAF1Q9H7N4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
SCAF1Q9H7N4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC32.92■■■□□ 2.86
SCAF1Q9H7N4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC32.92■■■□□ 2.86
SCAF1Q9H7N4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC32.92■■■□□ 2.86
SCAF1Q9H7N4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC32.92■■■□□ 2.86
SCAF1Q9H7N4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC32.92■■■□□ 2.86
SCAF1Q9H7N4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
SCAF1Q9H7N4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC32.92■■■□□ 2.86
SCAF1Q9H7N4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
SCAF1Q9H7N4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SCAF1Q9H7N4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC32.91■■■□□ 2.86
SCAF1Q9H7N4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC32.91■■■□□ 2.86
SCAF1Q9H7N4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SCAF1Q9H7N4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC32.91■■■□□ 2.86
SCAF1Q9H7N4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SCAF1Q9H7N4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SCAF1Q9H7N4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC32.91■■■□□ 2.86
SCAF1Q9H7N4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC32.9■■■□□ 2.86
SCAF1Q9H7N4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 SERBP1P1-201ENST00000396021 1160 ntBASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
SCAF1Q9H7N4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 GXYLT1P2-201ENST00000433312 1230 ntBASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 DUX4L2-201ENST00000561772 1275 ntBASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 DUX4L6-201ENST00000626483 1275 ntBASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 DUX4L1-201ENST00000627662 1275 ntBASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 DUX4L8-201ENST00000629013 1275 ntBASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 DUX4L3-201ENST00000630187 1275 ntBASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 DUX4L7-201ENST00000630678 1275 ntBASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 DUX4L5-201ENST00000630834 1275 ntBASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 AC066615.1-201ENST00000640911 628 ntBASIC32.88■■■□□ 2.85
SCAF1Q9H7N4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SCAF1Q9H7N4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC32.87■■■□□ 2.85
SCAF1Q9H7N4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
SCAF1Q9H7N4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SCAF1Q9H7N4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SCAF1Q9H7N4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
SCAF1Q9H7N4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SCAF1Q9H7N4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
SCAF1Q9H7N4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC32.86■■■□□ 2.85
SCAF1Q9H7N4 TMEM191A-211ENST00000637163 1067 ntBASIC32.86■■■□□ 2.85
SCAF1Q9H7N4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC32.86■■■□□ 2.85
SCAF1Q9H7N4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
SCAF1Q9H7N4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
SCAF1Q9H7N4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC32.85■■■□□ 2.85
SCAF1Q9H7N4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC32.85■■■□□ 2.85
SCAF1Q9H7N4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SCAF1Q9H7N4 AP004609.3-201ENST00000610705 1884 ntBASIC32.85■■■□□ 2.85
SCAF1Q9H7N4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
SCAF1Q9H7N4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SCAF1Q9H7N4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SCAF1Q9H7N4 AC092171.4-201ENST00000609130 632 ntBASIC32.84■■■□□ 2.85
SCAF1Q9H7N4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
SCAF1Q9H7N4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SCAF1Q9H7N4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
SCAF1Q9H7N4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
SCAF1Q9H7N4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SCAF1Q9H7N4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SCAF1Q9H7N4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SCAF1Q9H7N4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC32.83■■■□□ 2.85
SCAF1Q9H7N4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SCAF1Q9H7N4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SCAF1Q9H7N4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC32.83■■■□□ 2.85
SCAF1Q9H7N4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SCAF1Q9H7N4 YBX1P1-201ENST00000445822 960 ntBASIC32.82■■■□□ 2.84
SCAF1Q9H7N4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC32.82■■■□□ 2.84
SCAF1Q9H7N4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
SCAF1Q9H7N4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC32.82■■■□□ 2.84
SCAF1Q9H7N4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC32.82■■■□□ 2.84
SCAF1Q9H7N4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SCAF1Q9H7N4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
SCAF1Q9H7N4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SCAF1Q9H7N4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
SCAF1Q9H7N4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SCAF1Q9H7N4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC32.81■■■□□ 2.84
SCAF1Q9H7N4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC32.81■■■□□ 2.84
SCAF1Q9H7N4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC32.81■■■□□ 2.84
SCAF1Q9H7N4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SCAF1Q9H7N4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SCAF1Q9H7N4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC32.81■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms