Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC28.12■■■□□ 2.09
CHMP4BQ9H444 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHMP4BQ9H444 AC133561.1-201ENST00000568600 2415 ntBASIC28.12■■■□□ 2.09
CHMP4BQ9H444 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC28.12■■■□□ 2.09
CHMP4BQ9H444 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.12■■■□□ 2.09
CHMP4BQ9H444 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
CHMP4BQ9H444 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHMP4BQ9H444 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.11■■■□□ 2.09
CHMP4BQ9H444 AC009086.3-201ENST00000623486 1008 ntBASIC28.11■■■□□ 2.09
CHMP4BQ9H444 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP4BQ9H444 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP4BQ9H444 C17orf82-201ENST00000623772 1530 ntBASIC28.11■■■□□ 2.09
CHMP4BQ9H444 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP4BQ9H444 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.1■■■□□ 2.09
CHMP4BQ9H444 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP4BQ9H444 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP4BQ9H444 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP4BQ9H444 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
CHMP4BQ9H444 ESRRAP2-201ENST00000418437 1549 ntBASIC28.09■■■□□ 2.09
CHMP4BQ9H444 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP4BQ9H444 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.09■■■□□ 2.09
CHMP4BQ9H444 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.09■■■□□ 2.09
CHMP4BQ9H444 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP4BQ9H444 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 AL117332.1-201ENST00000622628 974 ntBASIC28.08■■■□□ 2.09
CHMP4BQ9H444 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
CHMP4BQ9H444 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 AL356740.2-201ENST00000601559 647 ntBASIC28.07■■■□□ 2.08
CHMP4BQ9H444 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP4BQ9H444 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.06■■■□□ 2.08
CHMP4BQ9H444 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.06■■■□□ 2.08
CHMP4BQ9H444 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHMP4BQ9H444 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHMP4BQ9H444 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.05■■■□□ 2.08
CHMP4BQ9H444 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
CHMP4BQ9H444 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHMP4BQ9H444 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CHMP4BQ9H444 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.03■■■□□ 2.08
CHMP4BQ9H444 AC241377.3-202ENST00000626088 1088 ntBASIC28.03■■■□□ 2.08
CHMP4BQ9H444 AC241585.3-202ENST00000628937 1088 ntBASIC28.03■■■□□ 2.08
CHMP4BQ9H444 AC245100.8-202ENST00000629247 1058 ntBASIC28.03■■■□□ 2.08
CHMP4BQ9H444 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHMP4BQ9H444 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
CHMP4BQ9H444 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
CHMP4BQ9H444 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHMP4BQ9H444 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.03■■■□□ 2.08
CHMP4BQ9H444 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
CHMP4BQ9H444 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC28.02■■■□□ 2.08
CHMP4BQ9H444 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
CHMP4BQ9H444 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP4BQ9H444 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP4BQ9H444 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP4BQ9H444 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC28.02■■■□□ 2.08
CHMP4BQ9H444 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP4BQ9H444 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.08
CHMP4BQ9H444 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHMP4BQ9H444 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.01■■■□□ 2.07
CHMP4BQ9H444 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CHMP4BQ9H444 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHMP4BQ9H444 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CHMP4BQ9H444 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms