Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
VCXQ9H320 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.27■■□□□ 1
VCXQ9H320 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.27■■□□□ 1
VCXQ9H320 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCXQ9H320 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VCXQ9H320 C11orf96-202ENST00000528572 1834 ntBASIC21.27■□□□□ 0.99
VCXQ9H320 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VCXQ9H320 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.26■□□□□ 0.99
VCXQ9H320 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.26■□□□□ 0.99
VCXQ9H320 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.26■□□□□ 0.99
VCXQ9H320 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VCXQ9H320 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VCXQ9H320 AC021231.2-201ENST00000594613 730 ntBASIC21.26■□□□□ 0.99
VCXQ9H320 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCXQ9H320 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCXQ9H320 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCXQ9H320 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCXQ9H320 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCXQ9H320 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCXQ9H320 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCXQ9H320 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
VCXQ9H320 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
VCXQ9H320 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.25■□□□□ 0.99
VCXQ9H320 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCXQ9H320 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCXQ9H320 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCXQ9H320 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.25■□□□□ 0.99
VCXQ9H320 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCXQ9H320 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCXQ9H320 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.25■□□□□ 0.99
VCXQ9H320 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VCXQ9H320 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCXQ9H320 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.24■□□□□ 0.99
VCXQ9H320 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCXQ9H320 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCXQ9H320 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCXQ9H320 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.24■□□□□ 0.99
VCXQ9H320 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.24■□□□□ 0.99
VCXQ9H320 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCXQ9H320 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCXQ9H320 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
VCXQ9H320 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.23■□□□□ 0.99
VCXQ9H320 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCXQ9H320 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCXQ9H320 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCXQ9H320 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
VCXQ9H320 AC044849.2-201ENST00000606596 710 ntBASIC21.23■□□□□ 0.99
VCXQ9H320 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VCXQ9H320 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
VCXQ9H320 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.23■□□□□ 0.99
VCXQ9H320 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VCXQ9H320 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.23■□□□□ 0.99
VCXQ9H320 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.23■□□□□ 0.99
VCXQ9H320 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.22■□□□□ 0.99
VCXQ9H320 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 AC026310.3-201ENST00000625186 2373 ntBASIC21.22■□□□□ 0.99
VCXQ9H320 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.22■□□□□ 0.99
VCXQ9H320 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
VCXQ9H320 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
VCXQ9H320 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCXQ9H320 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.22■□□□□ 0.99
VCXQ9H320 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VCXQ9H320 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.21■□□□□ 0.99
VCXQ9H320 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCXQ9H320 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCXQ9H320 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCXQ9H320 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCXQ9H320 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCXQ9H320 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VCXQ9H320 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.21■□□□□ 0.99
VCXQ9H320 DUX4L29-201ENST00000425409 679 ntBASIC21.21■□□□□ 0.99
VCXQ9H320 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.21■□□□□ 0.99
VCXQ9H320 AP006261.1-201ENST00000584783 668 ntBASIC21.21■□□□□ 0.99
VCXQ9H320 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
VCXQ9H320 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCXQ9H320 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.21■□□□□ 0.99
VCXQ9H320 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.21■□□□□ 0.99
VCXQ9H320 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VCXQ9H320 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VCXQ9H320 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VCXQ9H320 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VCXQ9H320 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCXQ9H320 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCXQ9H320 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCXQ9H320 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.2■□□□□ 0.98
VCXQ9H320 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VCXQ9H320 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.2■□□□□ 0.98
VCXQ9H320 AC087741.3-201ENST00000624270 1347 ntBASIC21.2■□□□□ 0.98
VCXQ9H320 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCXQ9H320 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCXQ9H320 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCXQ9H320 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms