Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDH23Q9H251 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDH23Q9H251 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDH23Q9H251 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.08■■□□□ 1.45
CDH23Q9H251 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CDH23Q9H251 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
CDH23Q9H251 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CDH23Q9H251 SLC7A5P2-201ENST00000553010 536 ntBASIC24.08■■□□□ 1.44
CDH23Q9H251 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.08■■□□□ 1.44
CDH23Q9H251 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CDH23Q9H251 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.07■■□□□ 1.44
CDH23Q9H251 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH23Q9H251 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
CDH23Q9H251 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CDH23Q9H251 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDH23Q9H251 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH23Q9H251 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH23Q9H251 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH23Q9H251 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH23Q9H251 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH23Q9H251 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDH23Q9H251 AC069152.1-201ENST00000438030 544 ntBASIC24.06■■□□□ 1.44
CDH23Q9H251 AC098934.4-201ENST00000564127 592 ntBASIC24.06■■□□□ 1.44
CDH23Q9H251 AP004607.4-201ENST00000530158 1459 ntBASIC24.06■■□□□ 1.44
CDH23Q9H251 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.06■■□□□ 1.44
CDH23Q9H251 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDH23Q9H251 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CDH23Q9H251 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDH23Q9H251 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.06■■□□□ 1.44
CDH23Q9H251 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CDH23Q9H251 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDH23Q9H251 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.05■■□□□ 1.44
CDH23Q9H251 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CDH23Q9H251 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDH23Q9H251 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDH23Q9H251 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.05■■□□□ 1.44
CDH23Q9H251 PRORSD1P-201ENST00000295112 541 ntBASIC24.05■■□□□ 1.44
CDH23Q9H251 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC24.05■■□□□ 1.44
CDH23Q9H251 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.05■■□□□ 1.44
CDH23Q9H251 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.05■■□□□ 1.44
CDH23Q9H251 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CDH23Q9H251 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDH23Q9H251 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.04■■□□□ 1.44
CDH23Q9H251 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.04■■□□□ 1.44
CDH23Q9H251 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.04■■□□□ 1.44
CDH23Q9H251 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.04■■□□□ 1.44
CDH23Q9H251 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDH23Q9H251 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDH23Q9H251 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDH23Q9H251 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.04■■□□□ 1.44
CDH23Q9H251 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH23Q9H251 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDH23Q9H251 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH23Q9H251 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.03■■□□□ 1.44
CDH23Q9H251 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.03■■□□□ 1.44
CDH23Q9H251 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDH23Q9H251 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH23Q9H251 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH23Q9H251 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDH23Q9H251 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH23Q9H251 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.03■■□□□ 1.44
CDH23Q9H251 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CDH23Q9H251 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDH23Q9H251 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.02■■□□□ 1.44
CDH23Q9H251 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CDH23Q9H251 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CDH23Q9H251 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.02■■□□□ 1.44
CDH23Q9H251 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.02■■□□□ 1.44
CDH23Q9H251 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.02■■□□□ 1.44
CDH23Q9H251 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.02■■□□□ 1.44
CDH23Q9H251 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24.01■■□□□ 1.43
CDH23Q9H251 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.01■■□□□ 1.43
CDH23Q9H251 AC011767.1-201ENST00000617410 1153 ntBASIC24.01■■□□□ 1.43
CDH23Q9H251 AL022069.1-201ENST00000568025 1636 ntBASIC24.01■■□□□ 1.43
CDH23Q9H251 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CDH23Q9H251 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CDH23Q9H251 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDH23Q9H251 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDH23Q9H251 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDH23Q9H251 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24■■□□□ 1.43
CDH23Q9H251 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CDH23Q9H251 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.99■■□□□ 1.43
CDH23Q9H251 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CDH23Q9H251 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
CDH23Q9H251 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.99■■□□□ 1.43
CDH23Q9H251 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.99■■□□□ 1.43
CDH23Q9H251 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.99■■□□□ 1.43
CDH23Q9H251 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDH23Q9H251 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDH23Q9H251 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDH23Q9H251 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDH23Q9H251 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CDH23Q9H251 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDH23Q9H251 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDH23Q9H251 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.99■■□□□ 1.43
CDH23Q9H251 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.99■■□□□ 1.43
CDH23Q9H251 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDH23Q9H251 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDH23Q9H251 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDH23Q9H251 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms