Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RNA5SP413-201ENST00000516373 109 ntBASIC21.39■■□□□ 1.01
CNTNAP3Q9BZ76 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.39■■□□□ 1.01
CNTNAP3Q9BZ76 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
CNTNAP3Q9BZ76 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP3Q9BZ76 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP3Q9BZ76 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP3Q9BZ76 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 KRT19P1-201ENST00000405746 1186 ntBASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CNTNAP3Q9BZ76 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
CNTNAP3Q9BZ76 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.37■■□□□ 1.01
CNTNAP3Q9BZ76 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3Q9BZ76 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3Q9BZ76 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3Q9BZ76 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP3Q9BZ76 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 AL158047.1-201ENST00000445918 881 ntBASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 AC091060.1-201ENST00000623524 1766 ntBASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP3Q9BZ76 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP3Q9BZ76 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNTNAP3Q9BZ76 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CNTNAP3Q9BZ76 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP3Q9BZ76 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP3Q9BZ76 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.35■■□□□ 1.01
CNTNAP3Q9BZ76 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 AC073210.2-201ENST00000430369 194 ntBASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 AC098934.4-201ENST00000564127 592 ntBASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNTNAP3Q9BZ76 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CNTNAP3Q9BZ76 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNTNAP3Q9BZ76 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.33■■□□□ 1.01
CNTNAP3Q9BZ76 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.33■■□□□ 1.01
CNTNAP3Q9BZ76 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP3Q9BZ76 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP3Q9BZ76 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CNTNAP3Q9BZ76 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 AC105233.4-201ENST00000642045 216 ntBASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNTNAP3Q9BZ76 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.31■■□□□ 1
CNTNAP3Q9BZ76 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP3Q9BZ76 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.3■■□□□ 1
CNTNAP3Q9BZ76 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.3■■□□□ 1
CNTNAP3Q9BZ76 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP3Q9BZ76 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.3■■□□□ 1
CNTNAP3Q9BZ76 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.3■■□□□ 1
CNTNAP3Q9BZ76 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.3■■□□□ 1
CNTNAP3Q9BZ76 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms