Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 LBH-205ENST00000407930 756 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC11.34□□□□□ -0.59
KRTAP3-1Q9BYR8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
KRTAP3-1Q9BYR8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
KRTAP3-1Q9BYR8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
KRTAP3-1Q9BYR8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC11.33□□□□□ -0.59
KRTAP3-1Q9BYR8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 GAK-223ENST00000628912 497 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-1Q9BYR8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 BID-212ENST00000614949 1988 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 AC026310.3-201ENST00000625186 2373 ntBASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-1Q9BYR8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 AC129492.7-201ENST00000622992 756 ntBASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 AF131216.4-201ENST00000638924 1588 ntBASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP3-1Q9BYR8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 ABHD17AP3-201ENST00000503096 1137 ntBASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-1Q9BYR8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-1Q9BYR8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-1Q9BYR8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms