Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.41■■□□□ 1.5
CBWD1Q9BRT8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.41■■□□□ 1.5
CBWD1Q9BRT8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CBWD1Q9BRT8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CBWD1Q9BRT8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.41■■□□□ 1.5
CBWD1Q9BRT8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CBWD1Q9BRT8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CBWD1Q9BRT8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CBWD1Q9BRT8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.4■■□□□ 1.5
CBWD1Q9BRT8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.4■■□□□ 1.5
CBWD1Q9BRT8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CBWD1Q9BRT8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CBWD1Q9BRT8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.4■■□□□ 1.5
CBWD1Q9BRT8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CBWD1Q9BRT8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CBWD1Q9BRT8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.39■■□□□ 1.5
CBWD1Q9BRT8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.39■■□□□ 1.49
CBWD1Q9BRT8 DUX4L4-201ENST00000566884 1269 ntBASIC24.39■■□□□ 1.49
CBWD1Q9BRT8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.39■■□□□ 1.49
CBWD1Q9BRT8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CBWD1Q9BRT8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CBWD1Q9BRT8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.39■■□□□ 1.49
CBWD1Q9BRT8 AC008406.3-201ENST00000620001 1374 ntBASIC24.39■■□□□ 1.49
CBWD1Q9BRT8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CBWD1Q9BRT8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CBWD1Q9BRT8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CBWD1Q9BRT8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.38■■□□□ 1.49
CBWD1Q9BRT8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CBWD1Q9BRT8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CBWD1Q9BRT8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CBWD1Q9BRT8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.38■■□□□ 1.49
CBWD1Q9BRT8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CBWD1Q9BRT8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
CBWD1Q9BRT8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CBWD1Q9BRT8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CBWD1Q9BRT8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CBWD1Q9BRT8 AC009086.3-201ENST00000623486 1008 ntBASIC24.37■■□□□ 1.49
CBWD1Q9BRT8 AC241377.3-202ENST00000626088 1088 ntBASIC24.37■■□□□ 1.49
CBWD1Q9BRT8 AC241585.3-202ENST00000628937 1088 ntBASIC24.37■■□□□ 1.49
CBWD1Q9BRT8 AC245100.8-202ENST00000629247 1058 ntBASIC24.37■■□□□ 1.49
CBWD1Q9BRT8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CBWD1Q9BRT8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.36■■□□□ 1.49
CBWD1Q9BRT8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CBWD1Q9BRT8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
CBWD1Q9BRT8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.36■■□□□ 1.49
CBWD1Q9BRT8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.36■■□□□ 1.49
CBWD1Q9BRT8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CBWD1Q9BRT8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.35■■□□□ 1.49
CBWD1Q9BRT8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.34■■□□□ 1.49
CBWD1Q9BRT8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
CBWD1Q9BRT8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.33■■□□□ 1.49
CBWD1Q9BRT8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CBWD1Q9BRT8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
CBWD1Q9BRT8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CBWD1Q9BRT8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
CBWD1Q9BRT8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CBWD1Q9BRT8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CBWD1Q9BRT8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.33■■□□□ 1.48
CBWD1Q9BRT8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.33■■□□□ 1.48
CBWD1Q9BRT8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CBWD1Q9BRT8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.32■■□□□ 1.48
CBWD1Q9BRT8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.31■■□□□ 1.48
CBWD1Q9BRT8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.31■■□□□ 1.48
CBWD1Q9BRT8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CBWD1Q9BRT8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CBWD1Q9BRT8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CBWD1Q9BRT8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CBWD1Q9BRT8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.3■■□□□ 1.48
CBWD1Q9BRT8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms