Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
FOXC2Q99958 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXC2Q99958 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXC2Q99958 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXC2Q99958 AL499627.2-201ENST00000606283 725 ntBASIC18.88■□□□□ 0.61
FOXC2Q99958 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXC2Q99958 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 AC010501.1-201ENST00000606270 1962 ntBASIC18.88■□□□□ 0.61
FOXC2Q99958 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXC2Q99958 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXC2Q99958 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
FOXC2Q99958 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXC2Q99958 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXC2Q99958 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
FOXC2Q99958 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.87■□□□□ 0.61
FOXC2Q99958 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXC2Q99958 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXC2Q99958 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.87■□□□□ 0.61
FOXC2Q99958 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXC2Q99958 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXC2Q99958 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXC2Q99958 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXC2Q99958 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXC2Q99958 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXC2Q99958 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXC2Q99958 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXC2Q99958 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXC2Q99958 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXC2Q99958 GPX1P1-201ENST00000388829 606 ntBASIC18.86■□□□□ 0.61
FOXC2Q99958 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
FOXC2Q99958 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXC2Q99958 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXC2Q99958 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXC2Q99958 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXC2Q99958 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXC2Q99958 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXC2Q99958 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXC2Q99958 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
FOXC2Q99958 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
FOXC2Q99958 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
FOXC2Q99958 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXC2Q99958 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
FOXC2Q99958 AL121749.1-202ENST00000609313 2153 ntBASIC18.85■□□□□ 0.61
FOXC2Q99958 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXC2Q99958 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXC2Q99958 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
FOXC2Q99958 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXC2Q99958 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXC2Q99958 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXC2Q99958 AC010525.1-201ENST00000585559 441 ntBASIC18.85■□□□□ 0.61
FOXC2Q99958 MIR6089-201ENST00000616698 64 ntBASIC18.85■□□□□ 0.61
FOXC2Q99958 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXC2Q99958 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
FOXC2Q99958 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXC2Q99958 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
FOXC2Q99958 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXC2Q99958 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXC2Q99958 AP004607.4-201ENST00000530158 1459 ntBASIC18.84■□□□□ 0.61
FOXC2Q99958 KRT19P1-201ENST00000405746 1186 ntBASIC18.84■□□□□ 0.61
FOXC2Q99958 KRT18P11-201ENST00000435214 1283 ntBASIC18.84■□□□□ 0.61
FOXC2Q99958 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXC2Q99958 TSPY20P-201ENST00000450910 630 ntBASIC18.84■□□□□ 0.61
FOXC2Q99958 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXC2Q99958 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXC2Q99958 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXC2Q99958 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXC2Q99958 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXC2Q99958 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXC2Q99958 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXC2Q99958 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXC2Q99958 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXC2Q99958 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXC2Q99958 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXC2Q99958 DUX4L4-201ENST00000566884 1269 ntBASIC18.83■□□□□ 0.6
FOXC2Q99958 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXC2Q99958 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXC2Q99958 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
FOXC2Q99958 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXC2Q99958 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXC2Q99958 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXC2Q99958 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXC2Q99958 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.83■□□□□ 0.6
FOXC2Q99958 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
FOXC2Q99958 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXC2Q99958 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXC2Q99958 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FOXC2Q99958 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXC2Q99958 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXC2Q99958 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXC2Q99958 AC142086.2-201ENST00000569753 217 ntBASIC18.82■□□□□ 0.6
FOXC2Q99958 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.82■□□□□ 0.6
FOXC2Q99958 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXC2Q99958 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXC2Q99958 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXC2Q99958 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXC2Q99958 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms