Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS1Q99742 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPAS1Q99742 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.33■□□□□ 0.84
NPAS1Q99742 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.33■□□□□ 0.84
NPAS1Q99742 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPAS1Q99742 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NPAS1Q99742 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPAS1Q99742 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPAS1Q99742 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.32■□□□□ 0.84
NPAS1Q99742 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.32■□□□□ 0.84
NPAS1Q99742 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS1Q99742 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS1Q99742 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS1Q99742 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NPAS1Q99742 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.32■□□□□ 0.84
NPAS1Q99742 AC008406.3-201ENST00000620001 1374 ntBASIC20.32■□□□□ 0.84
NPAS1Q99742 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NPAS1Q99742 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS1Q99742 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.31■□□□□ 0.84
NPAS1Q99742 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NPAS1Q99742 AC092068.2-201ENST00000590491 1708 ntBASIC20.31■□□□□ 0.84
NPAS1Q99742 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS1Q99742 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS1Q99742 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS1Q99742 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.31■□□□□ 0.84
NPAS1Q99742 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS1Q99742 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.31■□□□□ 0.84
NPAS1Q99742 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS1Q99742 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS1Q99742 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS1Q99742 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.31■□□□□ 0.84
NPAS1Q99742 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS1Q99742 AC079834.2-201ENST00000609776 1949 ntBASIC20.31■□□□□ 0.84
NPAS1Q99742 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS1Q99742 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.31■□□□□ 0.84
NPAS1Q99742 C9orf163-202ENST00000624034 2573 ntBASIC20.31■□□□□ 0.84
NPAS1Q99742 AC144652.1-201ENST00000609974 1624 ntBASIC20.31■□□□□ 0.84
NPAS1Q99742 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.3■□□□□ 0.84
NPAS1Q99742 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS1Q99742 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS1Q99742 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.3■□□□□ 0.84
NPAS1Q99742 AC006455.2-201ENST00000429931 906 ntBASIC20.3■□□□□ 0.84
NPAS1Q99742 AC099791.2-201ENST00000605725 427 ntBASIC20.3■□□□□ 0.84
NPAS1Q99742 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
NPAS1Q99742 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS1Q99742 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.3■□□□□ 0.84
NPAS1Q99742 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NPAS1Q99742 AL353803.4-201ENST00000565882 1934 ntBASIC20.29■□□□□ 0.84
NPAS1Q99742 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS1Q99742 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS1Q99742 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS1Q99742 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS1Q99742 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.29■□□□□ 0.84
NPAS1Q99742 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS1Q99742 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS1Q99742 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.29■□□□□ 0.84
NPAS1Q99742 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.29■□□□□ 0.84
NPAS1Q99742 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.29■□□□□ 0.84
NPAS1Q99742 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.29■□□□□ 0.84
NPAS1Q99742 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.29■□□□□ 0.84
NPAS1Q99742 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
NPAS1Q99742 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.29■□□□□ 0.84
NPAS1Q99742 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS1Q99742 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS1Q99742 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS1Q99742 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS1Q99742 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS1Q99742 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS1Q99742 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NPAS1Q99742 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS1Q99742 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPAS1Q99742 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS1Q99742 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS1Q99742 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NPAS1Q99742 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS1Q99742 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NPAS1Q99742 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS1Q99742 SRD5A1P1-201ENST00000442297 786 ntBASIC20.27■□□□□ 0.84
NPAS1Q99742 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS1Q99742 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.27■□□□□ 0.84
NPAS1Q99742 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS1Q99742 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS1Q99742 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS1Q99742 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.26■□□□□ 0.83
NPAS1Q99742 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.26■□□□□ 0.83
NPAS1Q99742 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS1Q99742 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS1Q99742 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS1Q99742 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS1Q99742 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NPAS1Q99742 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPAS1Q99742 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NPAS1Q99742 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.25■□□□□ 0.83
NPAS1Q99742 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.25■□□□□ 0.83
NPAS1Q99742 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.25■□□□□ 0.83
NPAS1Q99742 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPAS1Q99742 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS1Q99742 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS1Q99742 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS1Q99742 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms