Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
BARD1Q99728 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
BARD1Q99728 ANOS2P-203ENST00000472227 1816 ntBASIC21.25■□□□□ 0.99
BARD1Q99728 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BARD1Q99728 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BARD1Q99728 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.25■□□□□ 0.99
BARD1Q99728 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BARD1Q99728 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BARD1Q99728 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.25■□□□□ 0.99
BARD1Q99728 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BARD1Q99728 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BARD1Q99728 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BARD1Q99728 ZNRF2P3-201ENST00000424200 374 ntBASIC21.24■□□□□ 0.99
BARD1Q99728 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.24■□□□□ 0.99
BARD1Q99728 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.24■□□□□ 0.99
BARD1Q99728 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.24■□□□□ 0.99
BARD1Q99728 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
BARD1Q99728 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
BARD1Q99728 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BARD1Q99728 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
BARD1Q99728 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.23■□□□□ 0.99
BARD1Q99728 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
BARD1Q99728 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BARD1Q99728 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.23■□□□□ 0.99
BARD1Q99728 SNX5-217ENST00000606557 1087 ntBASIC21.23■□□□□ 0.99
BARD1Q99728 AL031432.3-201ENST00000607698 485 ntBASIC21.23■□□□□ 0.99
BARD1Q99728 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.23■□□□□ 0.99
BARD1Q99728 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.23■□□□□ 0.99
BARD1Q99728 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BARD1Q99728 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BARD1Q99728 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.23■□□□□ 0.99
BARD1Q99728 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BARD1Q99728 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BARD1Q99728 C1orf229-201ENST00000623686 2258 ntBASIC21.22■□□□□ 0.99
BARD1Q99728 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.22■□□□□ 0.99
BARD1Q99728 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.22■□□□□ 0.99
BARD1Q99728 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
BARD1Q99728 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.22■□□□□ 0.99
BARD1Q99728 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
BARD1Q99728 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
BARD1Q99728 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.22■□□□□ 0.99
BARD1Q99728 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BARD1Q99728 PBX2P1-201ENST00000493219 1291 ntBASIC21.22■□□□□ 0.99
BARD1Q99728 SUDS3P1-201ENST00000505831 966 ntBASIC21.22■□□□□ 0.99
BARD1Q99728 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BARD1Q99728 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.22■□□□□ 0.99
BARD1Q99728 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
BARD1Q99728 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
BARD1Q99728 LINC00565-201ENST00000562710 2331 ntBASIC21.22■□□□□ 0.99
BARD1Q99728 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BARD1Q99728 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BARD1Q99728 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BARD1Q99728 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BARD1Q99728 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BARD1Q99728 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.21■□□□□ 0.99
BARD1Q99728 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.21■□□□□ 0.99
BARD1Q99728 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.21■□□□□ 0.99
BARD1Q99728 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BARD1Q99728 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BARD1Q99728 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
BARD1Q99728 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
BARD1Q99728 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BARD1Q99728 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BARD1Q99728 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
BARD1Q99728 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.2■□□□□ 0.98
BARD1Q99728 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BARD1Q99728 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.2■□□□□ 0.98
BARD1Q99728 RARRES2P6-201ENST00000567333 442 ntBASIC21.2■□□□□ 0.98
BARD1Q99728 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
BARD1Q99728 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BARD1Q99728 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
BARD1Q99728 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BARD1Q99728 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BARD1Q99728 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.2■□□□□ 0.98
BARD1Q99728 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BARD1Q99728 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BARD1Q99728 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BARD1Q99728 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
BARD1Q99728 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BARD1Q99728 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.19■□□□□ 0.98
BARD1Q99728 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BARD1Q99728 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
BARD1Q99728 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
BARD1Q99728 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BARD1Q99728 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BARD1Q99728 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
BARD1Q99728 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BARD1Q99728 AC026271.2-201ENST00000428091 497 ntBASIC21.18■□□□□ 0.98
BARD1Q99728 AC142381.2-201ENST00000566120 298 ntBASIC21.18■□□□□ 0.98
BARD1Q99728 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.18■□□□□ 0.98
BARD1Q99728 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.18■□□□□ 0.98
BARD1Q99728 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BARD1Q99728 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BARD1Q99728 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.18■□□□□ 0.98
BARD1Q99728 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BARD1Q99728 DUSP8P3-201ENST00000399571 1760 ntBASIC21.18■□□□□ 0.98
BARD1Q99728 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BARD1Q99728 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BARD1Q99728 UNC93B3-201ENST00000308076 687 ntBASIC21.17■□□□□ 0.98
BARD1Q99728 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms