Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 DUX4L4-201ENST00000566884 1269 ntBASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 AC012414.1-201ENST00000556676 535 ntBASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM3Q96MP5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 AC123595.1-201ENST00000440769 1046 ntBASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.22■■□□□ 1.31
ZSWIM3Q96MP5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM3Q96MP5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 OR2I1P-207ENST00000453522 948 ntBASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 AC092437.1-201ENST00000624794 1048 ntBASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 RARRES2P11-201ENST00000635158 484 ntBASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM3Q96MP5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 AC090192.1-201ENST00000517740 490 ntBASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 AL354811.1-201ENST00000610286 706 ntBASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ZSWIM3Q96MP5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 CCDC92B-201ENST00000575506 885 ntBASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 AC144652.1-201ENST00000609974 1624 ntBASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM3Q96MP5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms