Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP9XQ93008 KRT18P11-201ENST00000435214 1283 ntBASIC19.76■□□□□ 0.75
USP9XQ93008 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.76■□□□□ 0.75
USP9XQ93008 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP9XQ93008 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
USP9XQ93008 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.75■□□□□ 0.75
USP9XQ93008 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP9XQ93008 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
USP9XQ93008 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
USP9XQ93008 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.75■□□□□ 0.75
USP9XQ93008 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP9XQ93008 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.75■□□□□ 0.75
USP9XQ93008 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP9XQ93008 AC141586.4-201ENST00000624558 1573 ntBASIC19.75■□□□□ 0.75
USP9XQ93008 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP9XQ93008 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP9XQ93008 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP9XQ93008 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP9XQ93008 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
USP9XQ93008 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.74■□□□□ 0.75
USP9XQ93008 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.74■□□□□ 0.75
USP9XQ93008 SLC6A10P-202ENST00000431994 2058 ntBASIC19.74■□□□□ 0.75
USP9XQ93008 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP9XQ93008 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.74■□□□□ 0.75
USP9XQ93008 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP9XQ93008 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.73■□□□□ 0.75
USP9XQ93008 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP9XQ93008 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.73■□□□□ 0.75
USP9XQ93008 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP9XQ93008 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.73■□□□□ 0.75
USP9XQ93008 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
USP9XQ93008 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.73■□□□□ 0.75
USP9XQ93008 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP9XQ93008 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.73■□□□□ 0.75
USP9XQ93008 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.73■□□□□ 0.75
USP9XQ93008 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.73■□□□□ 0.75
USP9XQ93008 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP9XQ93008 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP9XQ93008 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.72■□□□□ 0.75
USP9XQ93008 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.72■□□□□ 0.75
USP9XQ93008 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP9XQ93008 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP9XQ93008 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP9XQ93008 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.72■□□□□ 0.75
USP9XQ93008 AC011767.1-201ENST00000617410 1153 ntBASIC19.72■□□□□ 0.75
USP9XQ93008 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP9XQ93008 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP9XQ93008 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP9XQ93008 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP9XQ93008 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP9XQ93008 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.72■□□□□ 0.75
USP9XQ93008 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.72■□□□□ 0.75
USP9XQ93008 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.72■□□□□ 0.75
USP9XQ93008 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP9XQ93008 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.72■□□□□ 0.75
USP9XQ93008 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP9XQ93008 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP9XQ93008 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP9XQ93008 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP9XQ93008 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.71■□□□□ 0.75
USP9XQ93008 TSPY6P-201ENST00000448518 926 ntBASIC19.71■□□□□ 0.75
USP9XQ93008 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.71■□□□□ 0.75
USP9XQ93008 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP9XQ93008 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP9XQ93008 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP9XQ93008 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.71■□□□□ 0.75
USP9XQ93008 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP9XQ93008 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP9XQ93008 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP9XQ93008 SLC29A4P1-201ENST00000398760 971 ntBASIC19.7■□□□□ 0.74
USP9XQ93008 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.7■□□□□ 0.74
USP9XQ93008 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.7■□□□□ 0.74
USP9XQ93008 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.7■□□□□ 0.74
USP9XQ93008 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.7■□□□□ 0.74
USP9XQ93008 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP9XQ93008 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.7■□□□□ 0.74
USP9XQ93008 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP9XQ93008 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP9XQ93008 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
USP9XQ93008 OR2I1P-207ENST00000453522 948 ntBASIC19.7■□□□□ 0.74
USP9XQ93008 FAM201B-201ENST00000458407 597 ntBASIC19.7■□□□□ 0.74
USP9XQ93008 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP9XQ93008 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP9XQ93008 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP9XQ93008 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP9XQ93008 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP9XQ93008 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP9XQ93008 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
USP9XQ93008 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP9XQ93008 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.69■□□□□ 0.74
USP9XQ93008 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
USP9XQ93008 DUX4L4-201ENST00000566884 1269 ntBASIC19.69■□□□□ 0.74
USP9XQ93008 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP9XQ93008 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
USP9XQ93008 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP9XQ93008 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.68■□□□□ 0.74
USP9XQ93008 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP9XQ93008 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP9XQ93008 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP9XQ93008 AC010501.1-201ENST00000606270 1962 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms