Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HPS1Q92902 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.17■□□□□ 0.82
HPS1Q92902 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
HPS1Q92902 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HPS1Q92902 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HPS1Q92902 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HPS1Q92902 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
HPS1Q92902 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
HPS1Q92902 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.16■□□□□ 0.82
HPS1Q92902 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
HPS1Q92902 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HPS1Q92902 AC103724.3-201ENST00000564481 992 ntBASIC20.16■□□□□ 0.82
HPS1Q92902 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.16■□□□□ 0.82
HPS1Q92902 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HPS1Q92902 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HPS1Q92902 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HPS1Q92902 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HPS1Q92902 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HPS1Q92902 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.15■□□□□ 0.82
HPS1Q92902 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.15■□□□□ 0.82
HPS1Q92902 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.15■□□□□ 0.82
HPS1Q92902 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HPS1Q92902 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.15■□□□□ 0.82
HPS1Q92902 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.15■□□□□ 0.82
HPS1Q92902 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HPS1Q92902 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HPS1Q92902 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HPS1Q92902 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HPS1Q92902 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HPS1Q92902 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HPS1Q92902 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HPS1Q92902 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.14■□□□□ 0.81
HPS1Q92902 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HPS1Q92902 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HPS1Q92902 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HPS1Q92902 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HPS1Q92902 AL391422.3-201ENST00000603791 2761 ntBASIC20.14■□□□□ 0.81
HPS1Q92902 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HPS1Q92902 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.14■□□□□ 0.81
HPS1Q92902 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HPS1Q92902 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.13■□□□□ 0.81
HPS1Q92902 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HPS1Q92902 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HPS1Q92902 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HPS1Q92902 LONRF2P2-201ENST00000439212 571 ntBASIC20.13■□□□□ 0.81
HPS1Q92902 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.13■□□□□ 0.81
HPS1Q92902 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.13■□□□□ 0.81
HPS1Q92902 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HPS1Q92902 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HPS1Q92902 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HPS1Q92902 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
HPS1Q92902 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HPS1Q92902 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.12■□□□□ 0.81
HPS1Q92902 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.12■□□□□ 0.81
HPS1Q92902 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HPS1Q92902 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HPS1Q92902 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HPS1Q92902 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HPS1Q92902 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.12■□□□□ 0.81
HPS1Q92902 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HPS1Q92902 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.12■□□□□ 0.81
HPS1Q92902 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HPS1Q92902 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HPS1Q92902 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.12■□□□□ 0.81
HPS1Q92902 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HPS1Q92902 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HPS1Q92902 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HPS1Q92902 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS1Q92902 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS1Q92902 GUSBP5-201ENST00000418136 578 ntBASIC20.11■□□□□ 0.81
HPS1Q92902 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.11■□□□□ 0.81
HPS1Q92902 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS1Q92902 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.11■□□□□ 0.81
HPS1Q92902 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS1Q92902 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HPS1Q92902 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.11■□□□□ 0.81
HPS1Q92902 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.11■□□□□ 0.81
HPS1Q92902 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS1Q92902 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS1Q92902 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS1Q92902 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
HPS1Q92902 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.1■□□□□ 0.81
HPS1Q92902 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HPS1Q92902 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.1■□□□□ 0.81
HPS1Q92902 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.1■□□□□ 0.81
HPS1Q92902 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HPS1Q92902 AC022616.5-201ENST00000518796 181 ntBASIC20.1■□□□□ 0.81
HPS1Q92902 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS1Q92902 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS1Q92902 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms