Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
TMEM40Q8WWA1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM40Q8WWA1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM40Q8WWA1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM40Q8WWA1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.48■■□□□ 1.51
TMEM40Q8WWA1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM40Q8WWA1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.48■■□□□ 1.51
TMEM40Q8WWA1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.48■■□□□ 1.51
TMEM40Q8WWA1 AL031602.1-201ENST00000633169 911 ntBASIC24.48■■□□□ 1.51
TMEM40Q8WWA1 LINC01529-204ENST00000636474 1715 ntBASIC24.48■■□□□ 1.51
TMEM40Q8WWA1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM40Q8WWA1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 OR2I1P-207ENST00000453522 948 ntBASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM40Q8WWA1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TMEM40Q8WWA1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.45■■□□□ 1.5
TMEM40Q8WWA1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.45■■□□□ 1.5
TMEM40Q8WWA1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.45■■□□□ 1.5
TMEM40Q8WWA1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.45■■□□□ 1.5
TMEM40Q8WWA1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM40Q8WWA1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM40Q8WWA1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.44■■□□□ 1.5
TMEM40Q8WWA1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.44■■□□□ 1.5
TMEM40Q8WWA1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.44■■□□□ 1.5
TMEM40Q8WWA1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.44■■□□□ 1.5
TMEM40Q8WWA1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM40Q8WWA1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM40Q8WWA1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.44■■□□□ 1.5
TMEM40Q8WWA1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM40Q8WWA1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM40Q8WWA1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM40Q8WWA1 MIR572-201ENST00000384983 95 ntBASIC24.42■■□□□ 1.5
TMEM40Q8WWA1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM40Q8WWA1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM40Q8WWA1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM40Q8WWA1 ABCB10P4-201ENST00000566803 2184 ntBASIC24.42■■□□□ 1.5
TMEM40Q8WWA1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM40Q8WWA1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 YBX1P1-201ENST00000445822 960 ntBASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 MIR6084-201ENST00000622012 110 ntBASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.41■■□□□ 1.5
TMEM40Q8WWA1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM40Q8WWA1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms