Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 AC091060.1-201ENST00000623524 1766 ntBASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 AC006970.2-201ENST00000450065 779 ntBASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
SNIP1Q8TAD8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 AP005435.1-201ENST00000529293 1178 ntBASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 BID-214ENST00000617586 542 ntTSL 5 BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 AL109923.1-201ENST00000618799 583 ntBASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 AC105233.4-201ENST00000642045 216 ntBASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNIP1Q8TAD8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 AL499627.2-201ENST00000606283 725 ntBASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.1■□□□□ 0.97
SNIP1Q8TAD8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 AC010525.1-201ENST00000585559 441 ntBASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SNIP1Q8TAD8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.08■□□□□ 0.97
SNIP1Q8TAD8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNIP1Q8TAD8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.08■□□□□ 0.97
SNIP1Q8TAD8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SNIP1Q8TAD8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNIP1Q8TAD8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNIP1Q8TAD8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.08■□□□□ 0.97
SNIP1Q8TAD8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.08■□□□□ 0.97
SNIP1Q8TAD8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.08■□□□□ 0.96
SNIP1Q8TAD8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SNIP1Q8TAD8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
SNIP1Q8TAD8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNIP1Q8TAD8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SNIP1Q8TAD8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 NCF1B-203ENST00000435988 1254 ntBASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 CROCCP5-201ENST00000436658 830 ntBASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.07■□□□□ 0.96
SNIP1Q8TAD8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 SLC6A10P-202ENST00000431994 2058 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms