Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CSNK2A3Q8NEV1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 AC239859.2-201ENST00000444165 318 ntBASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 MTDHP2-201ENST00000601468 714 ntBASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSNK2A3Q8NEV1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 DUSP8P3-201ENST00000399571 1760 ntBASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 AL451085.2-201ENST00000605085 799 ntBASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CSNK2A3Q8NEV1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.34■□□□□ 0.69
CSNK2A3Q8NEV1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSNK2A3Q8NEV1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSNK2A3Q8NEV1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.33■□□□□ 0.69
CSNK2A3Q8NEV1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSNK2A3Q8NEV1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSNK2A3Q8NEV1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSNK2A3Q8NEV1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CSNK2A3Q8NEV1 AC233723.2-201ENST00000623798 2106 ntBASIC19.33■□□□□ 0.68
CSNK2A3Q8NEV1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.33■□□□□ 0.68
CSNK2A3Q8NEV1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CSNK2A3Q8NEV1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CSNK2A3Q8NEV1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 AC079630.1-202ENST00000618127 1840 ntBASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 AC010997.5-201ENST00000609182 354 ntBASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.3■□□□□ 0.68
CSNK2A3Q8NEV1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms