Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
TTC9BQ8N6N2 LINC01529-204ENST00000636474 1715 ntBASIC23.56■■□□□ 1.36
TTC9BQ8N6N2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 AC079630.1-202ENST00000618127 1840 ntBASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC9BQ8N6N2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 AC087623.3-201ENST00000607047 1098 ntBASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC9BQ8N6N2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 TSPY26P-201ENST00000476365 1326 ntBASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC9BQ8N6N2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
TTC9BQ8N6N2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 MIR6821-201ENST00000617625 74 ntBASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TTC9BQ8N6N2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.5■■□□□ 1.35
TTC9BQ8N6N2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
TTC9BQ8N6N2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.5■■□□□ 1.35
TTC9BQ8N6N2 AC097381.1-201ENST00000429019 1296 ntBASIC23.5■■□□□ 1.35
TTC9BQ8N6N2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.5■■□□□ 1.35
TTC9BQ8N6N2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC9BQ8N6N2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC9BQ8N6N2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 MIR5787-201ENST00000611784 55 ntBASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.49■■□□□ 1.35
TTC9BQ8N6N2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 OR2I1P-207ENST00000453522 948 ntBASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms