Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SYNPOQ8N3V7 LINC02228-203ENST00000641970 1355 ntBASIC22.79■■□□□ 1.24
SYNPOQ8N3V7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
SYNPOQ8N3V7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.79■■□□□ 1.24
SYNPOQ8N3V7 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.79■■□□□ 1.24
SYNPOQ8N3V7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.79■■□□□ 1.24
SYNPOQ8N3V7 MIR6084-201ENST00000622012 110 ntBASIC22.79■■□□□ 1.24
SYNPOQ8N3V7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SYNPOQ8N3V7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SYNPOQ8N3V7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SYNPOQ8N3V7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SYNPOQ8N3V7 AC004911.1-201ENST00000416316 871 ntBASIC22.78■■□□□ 1.24
SYNPOQ8N3V7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.78■■□□□ 1.24
SYNPOQ8N3V7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
SYNPOQ8N3V7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
SYNPOQ8N3V7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.78■■□□□ 1.24
SYNPOQ8N3V7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.78■■□□□ 1.24
SYNPOQ8N3V7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SYNPOQ8N3V7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 OR2I1P-207ENST00000453522 948 ntBASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 TERF1P2-201ENST00000583350 1212 ntBASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 NTF6G-201ENST00000591094 616 ntBASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 AC093323.1-202ENST00000635031 2045 ntBASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.77■■□□□ 1.24
SYNPOQ8N3V7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
SYNPOQ8N3V7 FP325331.1-202ENST00000623531 1380 ntBASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 KRT18P14-201ENST00000534205 1250 ntBASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SYNPOQ8N3V7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 ID1-201ENST00000376105 1233 ntBASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SYNPOQ8N3V7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SYNPOQ8N3V7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SYNPOQ8N3V7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.74■■□□□ 1.23
SYNPOQ8N3V7 AP005435.1-201ENST00000529293 1178 ntBASIC22.74■■□□□ 1.23
SYNPOQ8N3V7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.74■■□□□ 1.23
SYNPOQ8N3V7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.74■■□□□ 1.23
SYNPOQ8N3V7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SYNPOQ8N3V7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.74■■□□□ 1.23
SYNPOQ8N3V7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SYNPOQ8N3V7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SYNPOQ8N3V7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
SYNPOQ8N3V7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 DUX4L4-201ENST00000566884 1269 ntBASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SYNPOQ8N3V7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.23
SYNPOQ8N3V7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms