Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.05■■□□□ 1.12
CPNE9Q8IYJ1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE9Q8IYJ1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CPNE9Q8IYJ1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
CPNE9Q8IYJ1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.05■■□□□ 1.12
CPNE9Q8IYJ1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE9Q8IYJ1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
CPNE9Q8IYJ1 AC144652.1-201ENST00000609974 1624 ntBASIC22.04■■□□□ 1.12
CPNE9Q8IYJ1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.04■■□□□ 1.12
CPNE9Q8IYJ1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CPNE9Q8IYJ1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE9Q8IYJ1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE9Q8IYJ1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE9Q8IYJ1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CPNE9Q8IYJ1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 GUSBP5-201ENST00000418136 578 ntBASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE9Q8IYJ1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
CPNE9Q8IYJ1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.02■■□□□ 1.12
CPNE9Q8IYJ1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPNE9Q8IYJ1 KRT16P3-201ENST00000439127 1283 ntBASIC22.02■■□□□ 1.12
CPNE9Q8IYJ1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.02■■□□□ 1.12
CPNE9Q8IYJ1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.02■■□□□ 1.12
CPNE9Q8IYJ1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.02■■□□□ 1.12
CPNE9Q8IYJ1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPNE9Q8IYJ1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.02■■□□□ 1.11
CPNE9Q8IYJ1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.02■■□□□ 1.11
CPNE9Q8IYJ1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 MIR6724-1-201ENST00000616420 92 ntBASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 MIR6724-2-201ENST00000616483 92 ntBASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 MIR6724-4-201ENST00000617390 92 ntBASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 MIR6724-3-201ENST00000622482 92 ntBASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE9Q8IYJ1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22■■□□□ 1.11
CPNE9Q8IYJ1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CPNE9Q8IYJ1 C1orf229-201ENST00000623686 2258 ntBASIC22■■□□□ 1.11
CPNE9Q8IYJ1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CPNE9Q8IYJ1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPNE9Q8IYJ1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE9Q8IYJ1 AC009102.2-201ENST00000606772 1639 ntBASIC22■■□□□ 1.11
CPNE9Q8IYJ1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
CPNE9Q8IYJ1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE9Q8IYJ1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE9Q8IYJ1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPNE9Q8IYJ1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE9Q8IYJ1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE9Q8IYJ1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE9Q8IYJ1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE9Q8IYJ1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE9Q8IYJ1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE9Q8IYJ1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.97■■□□□ 1.11
CPNE9Q8IYJ1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE9Q8IYJ1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.97■■□□□ 1.11
CPNE9Q8IYJ1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE9Q8IYJ1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.97■■□□□ 1.11
CPNE9Q8IYJ1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CPNE9Q8IYJ1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE9Q8IYJ1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CPNE9Q8IYJ1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.96■■□□□ 1.11
CPNE9Q8IYJ1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CPNE9Q8IYJ1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE9Q8IYJ1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.96■■□□□ 1.11
CPNE9Q8IYJ1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.96■■□□□ 1.11
CPNE9Q8IYJ1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE9Q8IYJ1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE9Q8IYJ1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CPNE9Q8IYJ1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.95■■□□□ 1.1
CPNE9Q8IYJ1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms