Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 SPCS2P3-201ENST00000500401 656 ntBASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 AC079630.1-202ENST00000618127 1840 ntBASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.56■■□□□ 1.2
SRRM1Q8IYB3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRRM1Q8IYB3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 AL024507.2-201ENST00000606070 2574 ntBASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SRRM1Q8IYB3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SRRM1Q8IYB3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SRRM1Q8IYB3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SRRM1Q8IYB3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
SRRM1Q8IYB3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SRRM1Q8IYB3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SRRM1Q8IYB3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SRRM1Q8IYB3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SRRM1Q8IYB3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
SRRM1Q8IYB3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 AC139530.1-201ENST00000575312 1977 ntBASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SRRM1Q8IYB3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 KRT18P60-201ENST00000312876 1297 ntBASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 AL035685.1-201ENST00000636663 812 ntBASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 C11orf96-202ENST00000528572 1834 ntBASIC22.5■■□□□ 1.19
SRRM1Q8IYB3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 AL592293.1-201ENST00000502889 1188 ntBASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 AC092053.2-201ENST00000640557 1818 ntBASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SRRM1Q8IYB3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SRRM1Q8IYB3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SRRM1Q8IYB3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SRRM1Q8IYB3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SRRM1Q8IYB3 MIR935-201ENST00000401179 91 ntBASIC22.48■■□□□ 1.19
SRRM1Q8IYB3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.48■■□□□ 1.19
SRRM1Q8IYB3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SRRM1Q8IYB3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SRRM1Q8IYB3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms