Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 AL138724.1-201ENST00000606771 1088 ntBASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 AC135279.3-201ENST00000610945 1311 ntBASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf40Q8IXQ3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 PBX2P1-201ENST00000493219 1291 ntBASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 AC106739.1-201ENST00000617035 715 ntBASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.66■□□□□ 0.9
C9orf40Q8IXQ3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 AL499627.2-201ENST00000606283 725 ntBASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 AC011298.3-201ENST00000615796 283 ntBASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf40Q8IXQ3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.64■□□□□ 0.9
C9orf40Q8IXQ3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C9orf40Q8IXQ3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
C9orf40Q8IXQ3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
C9orf40Q8IXQ3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
C9orf40Q8IXQ3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf40Q8IXQ3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf40Q8IXQ3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 MIR638-201ENST00000385237 100 ntBASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 MIR4767-201ENST00000582827 78 ntBASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 AC136469.2-201ENST00000623944 1028 ntBASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C9orf40Q8IXQ3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 AC133637.1-201ENST00000624115 1537 ntBASIC20.61■□□□□ 0.89
C9orf40Q8IXQ3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms