Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SFTPA1Q8IWL2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SFTPA1Q8IWL2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.76■■□□□ 1.23
SFTPA1Q8IWL2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.76■■□□□ 1.23
SFTPA1Q8IWL2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SFTPA1Q8IWL2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 KRT18P5-201ENST00000436075 1291 ntBASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 AC034268.1-201ENST00000441047 882 ntBASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 DUX4L4-201ENST00000566884 1269 ntBASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SFTPA1Q8IWL2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 MIR572-201ENST00000384983 95 ntBASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.73■■□□□ 1.23
SFTPA1Q8IWL2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 AC004812.2-201ENST00000611079 2094 ntBASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 AC144652.1-201ENST00000609974 1624 ntBASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 FP325331.1-202ENST00000623531 1380 ntBASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 LINC01124-201ENST00000409786 2117 ntBASIC22.72■■□□□ 1.23
SFTPA1Q8IWL2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 AC012414.1-201ENST00000556676 535 ntBASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 AC022517.1-201ENST00000592429 346 ntBASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SFTPA1Q8IWL2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
SFTPA1Q8IWL2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
SFTPA1Q8IWL2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.7■■□□□ 1.22
SFTPA1Q8IWL2 AC027612.3-201ENST00000413684 1047 ntBASIC22.7■■□□□ 1.22
SFTPA1Q8IWL2 OR2I1P-207ENST00000453522 948 ntBASIC22.7■■□□□ 1.22
SFTPA1Q8IWL2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SFTPA1Q8IWL2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SFTPA1Q8IWL2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SFTPA1Q8IWL2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SFTPA1Q8IWL2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SFTPA1Q8IWL2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SFTPA1Q8IWL2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 LINC01529-204ENST00000636474 1715 ntBASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 AL358852.1-201ENST00000623174 1268 ntBASIC22.69■■□□□ 1.22
SFTPA1Q8IWL2 AC092437.1-201ENST00000624794 1048 ntBASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms