Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CROCCP3Q8IVE0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.18■□□□□ 0.82
CROCCP3Q8IVE0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.18■□□□□ 0.82
CROCCP3Q8IVE0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CROCCP3Q8IVE0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CROCCP3Q8IVE0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CROCCP3Q8IVE0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CROCCP3Q8IVE0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CROCCP3Q8IVE0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.18■□□□□ 0.82
CROCCP3Q8IVE0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CROCCP3Q8IVE0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.17■□□□□ 0.82
CROCCP3Q8IVE0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CROCCP3Q8IVE0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CROCCP3Q8IVE0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.15■□□□□ 0.82
CROCCP3Q8IVE0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CROCCP3Q8IVE0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.15■□□□□ 0.82
CROCCP3Q8IVE0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CROCCP3Q8IVE0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CROCCP3Q8IVE0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CROCCP3Q8IVE0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CROCCP3Q8IVE0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.14■□□□□ 0.82
CROCCP3Q8IVE0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CROCCP3Q8IVE0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.14■□□□□ 0.81
CROCCP3Q8IVE0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CROCCP3Q8IVE0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CROCCP3Q8IVE0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CROCCP3Q8IVE0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CROCCP3Q8IVE0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CROCCP3Q8IVE0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CROCCP3Q8IVE0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CROCCP3Q8IVE0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.13■□□□□ 0.81
CROCCP3Q8IVE0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.12■□□□□ 0.81
CROCCP3Q8IVE0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CROCCP3Q8IVE0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CROCCP3Q8IVE0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CROCCP3Q8IVE0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.12■□□□□ 0.81
CROCCP3Q8IVE0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CROCCP3Q8IVE0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CROCCP3Q8IVE0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CROCCP3Q8IVE0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CROCCP3Q8IVE0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CROCCP3Q8IVE0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.11■□□□□ 0.81
CROCCP3Q8IVE0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CROCCP3Q8IVE0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CROCCP3Q8IVE0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CROCCP3Q8IVE0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CROCCP3Q8IVE0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.11■□□□□ 0.81
CROCCP3Q8IVE0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CROCCP3Q8IVE0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP3Q8IVE0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP3Q8IVE0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP3Q8IVE0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP3Q8IVE0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP3Q8IVE0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP3Q8IVE0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms