Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL55Q7Z7F7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC14.27□□□□□ -0.12
MRPL55Q7Z7F7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.27□□□□□ -0.12
MRPL55Q7Z7F7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.27□□□□□ -0.12
MRPL55Q7Z7F7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.27□□□□□ -0.12
MRPL55Q7Z7F7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.27□□□□□ -0.12
MRPL55Q7Z7F7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
MRPL55Q7Z7F7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL55Q7Z7F7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL55Q7Z7F7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL55Q7Z7F7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 AC103724.3-201ENST00000564481 992 ntBASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL55Q7Z7F7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 AC103834.1-201ENST00000520383 144 ntBASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 AL031848.2-201ENST00000607670 837 ntBASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MRPL55Q7Z7F7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL55Q7Z7F7 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms