Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 IKBKGP1-201ENST00000612193 1073 ntBASIC25.64■■□□□ 1.7
SH3RF1Q7Z6J0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.64■■□□□ 1.69
SH3RF1Q7Z6J0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SH3RF1Q7Z6J0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SH3RF1Q7Z6J0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SH3RF1Q7Z6J0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.64■■□□□ 1.69
SH3RF1Q7Z6J0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 AC027682.1-201ENST00000562846 899 ntBASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3RF1Q7Z6J0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SH3RF1Q7Z6J0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SH3RF1Q7Z6J0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.62■■□□□ 1.69
SH3RF1Q7Z6J0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.62■■□□□ 1.69
SH3RF1Q7Z6J0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.62■■□□□ 1.69
SH3RF1Q7Z6J0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.62■■□□□ 1.69
SH3RF1Q7Z6J0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
SH3RF1Q7Z6J0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
SH3RF1Q7Z6J0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 AC012676.1-201ENST00000574705 1949 ntBASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 AC005703.6-201ENST00000623265 1329 ntBASIC25.61■■□□□ 1.69
SH3RF1Q7Z6J0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.6■■□□□ 1.69
SH3RF1Q7Z6J0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.6■■□□□ 1.69
SH3RF1Q7Z6J0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SH3RF1Q7Z6J0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SH3RF1Q7Z6J0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.6■■□□□ 1.69
SH3RF1Q7Z6J0 ANOS2P-203ENST00000472227 1816 ntBASIC25.6■■□□□ 1.69
SH3RF1Q7Z6J0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.6■■□□□ 1.69
SH3RF1Q7Z6J0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 AC099791.1-201ENST00000416440 715 ntBASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 AC099791.2-201ENST00000605725 427 ntBASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.59■■□□□ 1.69
SH3RF1Q7Z6J0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 AC092171.4-201ENST00000609130 632 ntBASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
SH3RF1Q7Z6J0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SH3RF1Q7Z6J0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.57■■□□□ 1.68
SH3RF1Q7Z6J0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SH3RF1Q7Z6J0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SH3RF1Q7Z6J0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.57■■□□□ 1.68
SH3RF1Q7Z6J0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.57■■□□□ 1.68
SH3RF1Q7Z6J0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.57■■□□□ 1.68
SH3RF1Q7Z6J0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SH3RF1Q7Z6J0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SH3RF1Q7Z6J0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.56■■□□□ 1.68
SH3RF1Q7Z6J0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SH3RF1Q7Z6J0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SH3RF1Q7Z6J0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SH3RF1Q7Z6J0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.56■■□□□ 1.68
SH3RF1Q7Z6J0 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.56■■□□□ 1.68
SH3RF1Q7Z6J0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
SH3RF1Q7Z6J0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.56■■□□□ 1.68
SH3RF1Q7Z6J0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 ALDH1A3-203ENST00000557963 1670 ntBASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 AC092068.2-201ENST00000590491 1708 ntBASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 AC022517.1-201ENST00000592429 346 ntBASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
SH3RF1Q7Z6J0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF1Q7Z6J0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms