Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCXQ7RTU7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCXQ7RTU7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
SCXQ7RTU7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCXQ7RTU7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SCXQ7RTU7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SCXQ7RTU7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SCXQ7RTU7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC14.58□□□□□ -0.08
SCXQ7RTU7 UNC93B3-201ENST00000308076 687 ntBASIC14.58□□□□□ -0.08
SCXQ7RTU7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SCXQ7RTU7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SCXQ7RTU7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SCXQ7RTU7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SCXQ7RTU7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCXQ7RTU7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCXQ7RTU7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCXQ7RTU7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCXQ7RTU7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCXQ7RTU7 AL136162.1-201ENST00000607711 1078 ntBASIC14.57□□□□□ -0.08
SCXQ7RTU7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCXQ7RTU7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCXQ7RTU7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCXQ7RTU7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCXQ7RTU7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.57□□□□□ -0.08
SCXQ7RTU7 AC131274.2-201ENST00000580697 1507 ntBASIC14.56□□□□□ -0.08
SCXQ7RTU7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SCXQ7RTU7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.56□□□□□ -0.08
SCXQ7RTU7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 AC135279.3-201ENST00000610945 1311 ntBASIC14.56□□□□□ -0.08
SCXQ7RTU7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC14.56□□□□□ -0.08
SCXQ7RTU7 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.56□□□□□ -0.08
SCXQ7RTU7 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.56□□□□□ -0.08
SCXQ7RTU7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.56□□□□□ -0.08
SCXQ7RTU7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SCXQ7RTU7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCXQ7RTU7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCXQ7RTU7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCXQ7RTU7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SCXQ7RTU7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 AC142381.2-201ENST00000566120 298 ntBASIC14.55□□□□□ -0.08
SCXQ7RTU7 MIR6089-201ENST00000616698 64 ntBASIC14.55□□□□□ -0.08
SCXQ7RTU7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 AC022211.4-201ENST00000625094 2161 ntBASIC14.55□□□□□ -0.08
SCXQ7RTU7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCXQ7RTU7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCXQ7RTU7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCXQ7RTU7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCXQ7RTU7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SCXQ7RTU7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SCXQ7RTU7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC14.54□□□□□ -0.08
SCXQ7RTU7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SCXQ7RTU7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SCXQ7RTU7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SCXQ7RTU7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SCXQ7RTU7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.54□□□□□ -0.08
SCXQ7RTU7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SCXQ7RTU7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SCXQ7RTU7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SCXQ7RTU7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.54□□□□□ -0.08
SCXQ7RTU7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC14.54□□□□□ -0.08
SCXQ7RTU7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SCXQ7RTU7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SCXQ7RTU7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SCXQ7RTU7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SCXQ7RTU7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SCXQ7RTU7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCXQ7RTU7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCXQ7RTU7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCXQ7RTU7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SCXQ7RTU7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SCXQ7RTU7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCXQ7RTU7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms