Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
H3F3CQ6NXT2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.66■□□□□ 0.9
H3F3CQ6NXT2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3F3CQ6NXT2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H3F3CQ6NXT2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
H3F3CQ6NXT2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
H3F3CQ6NXT2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
H3F3CQ6NXT2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
H3F3CQ6NXT2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
H3F3CQ6NXT2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.64■□□□□ 0.89
H3F3CQ6NXT2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
H3F3CQ6NXT2 RARRES2P6-201ENST00000567333 442 ntBASIC20.64■□□□□ 0.89
H3F3CQ6NXT2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.64■□□□□ 0.89
H3F3CQ6NXT2 AC004812.2-201ENST00000611079 2094 ntBASIC20.64■□□□□ 0.89
H3F3CQ6NXT2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
H3F3CQ6NXT2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H3F3CQ6NXT2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 AC133637.1-201ENST00000624115 1537 ntBASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 AC026271.2-201ENST00000428091 497 ntBASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 LINC01529-204ENST00000636474 1715 ntBASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H3F3CQ6NXT2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3F3CQ6NXT2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H3F3CQ6NXT2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.62■□□□□ 0.89
H3F3CQ6NXT2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3F3CQ6NXT2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3F3CQ6NXT2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.62■□□□□ 0.89
H3F3CQ6NXT2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3F3CQ6NXT2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H3F3CQ6NXT2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H3F3CQ6NXT2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 IRS3P-201ENST00000223076 1006 ntBASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 SLC47A1P1-202ENST00000449666 945 ntBASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H3F3CQ6NXT2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H3F3CQ6NXT2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.58■□□□□ 0.89
H3F3CQ6NXT2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H3F3CQ6NXT2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H3F3CQ6NXT2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
H3F3CQ6NXT2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.58■□□□□ 0.89
H3F3CQ6NXT2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.58■□□□□ 0.89
H3F3CQ6NXT2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
H3F3CQ6NXT2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
H3F3CQ6NXT2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
H3F3CQ6NXT2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.57■□□□□ 0.88
H3F3CQ6NXT2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms