Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRK2Q5S007 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LRRK2Q5S007 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRK2Q5S007 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRK2Q5S007 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRK2Q5S007 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRK2Q5S007 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRK2Q5S007 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.71■□□□□ 0.75
LRRK2Q5S007 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRK2Q5S007 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRK2Q5S007 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRK2Q5S007 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRK2Q5S007 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRK2Q5S007 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRK2Q5S007 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRK2Q5S007 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRK2Q5S007 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRK2Q5S007 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRK2Q5S007 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRK2Q5S007 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRK2Q5S007 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRK2Q5S007 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LRRK2Q5S007 AC133637.1-201ENST00000624115 1537 ntBASIC19.7■□□□□ 0.74
LRRK2Q5S007 KRT18P29-201ENST00000397031 1267 ntBASIC19.7■□□□□ 0.74
LRRK2Q5S007 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRK2Q5S007 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.7■□□□□ 0.74
LRRK2Q5S007 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.7■□□□□ 0.74
LRRK2Q5S007 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRK2Q5S007 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRK2Q5S007 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRRK2Q5S007 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
LRRK2Q5S007 ERN1-208ENST00000606895 2068 ntBASIC19.69■□□□□ 0.74
LRRK2Q5S007 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRK2Q5S007 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRRK2Q5S007 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRK2Q5S007 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRRK2Q5S007 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRK2Q5S007 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRRK2Q5S007 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRK2Q5S007 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRK2Q5S007 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRRK2Q5S007 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRK2Q5S007 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRK2Q5S007 AC005181.1-201ENST00000604782 1256 ntBASIC19.68■□□□□ 0.74
LRRK2Q5S007 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRK2Q5S007 AC141586.4-201ENST00000624558 1573 ntBASIC19.68■□□□□ 0.74
LRRK2Q5S007 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRK2Q5S007 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.68■□□□□ 0.74
LRRK2Q5S007 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LRRK2Q5S007 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRK2Q5S007 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
LRRK2Q5S007 AC098590.1-201ENST00000468126 897 ntBASIC19.67■□□□□ 0.74
LRRK2Q5S007 AF201337.1-201ENST00000520239 748 ntBASIC19.67■□□□□ 0.74
LRRK2Q5S007 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRK2Q5S007 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRK2Q5S007 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRRK2Q5S007 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.67■□□□□ 0.74
LRRK2Q5S007 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.67■□□□□ 0.74
LRRK2Q5S007 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRK2Q5S007 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRK2Q5S007 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRK2Q5S007 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRK2Q5S007 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRK2Q5S007 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
LRRK2Q5S007 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRK2Q5S007 AC007322.1-201ENST00000426983 750 ntBASIC19.66■□□□□ 0.74
LRRK2Q5S007 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.66■□□□□ 0.74
LRRK2Q5S007 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRK2Q5S007 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.66■□□□□ 0.74
LRRK2Q5S007 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRK2Q5S007 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRK2Q5S007 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRK2Q5S007 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRRK2Q5S007 RPS2P52-201ENST00000469610 820 ntBASIC19.66■□□□□ 0.74
LRRK2Q5S007 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRK2Q5S007 AC010525.1-201ENST00000585559 441 ntBASIC19.66■□□□□ 0.74
LRRK2Q5S007 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRK2Q5S007 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRK2Q5S007 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRK2Q5S007 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LRRK2Q5S007 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRK2Q5S007 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRK2Q5S007 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRK2Q5S007 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRK2Q5S007 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRK2Q5S007 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRRK2Q5S007 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.64■□□□□ 0.74
LRRK2Q5S007 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LRRK2Q5S007 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRK2Q5S007 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRK2Q5S007 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRK2Q5S007 AC105233.4-201ENST00000642045 216 ntBASIC19.64■□□□□ 0.73
LRRK2Q5S007 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRK2Q5S007 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRK2Q5S007 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRK2Q5S007 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRK2Q5S007 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRK2Q5S007 OR2I1P-207ENST00000453522 948 ntBASIC19.63■□□□□ 0.73
LRRK2Q5S007 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
LRRK2Q5S007 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms