Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL139125.2-201ENST00000623134 1869 ntBASIC26.28■■□□□ 1.8
SHROOM1Q2M3G4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHROOM1Q2M3G4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHROOM1Q2M3G4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
SHROOM1Q2M3G4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SHROOM1Q2M3G4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHROOM1Q2M3G4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHROOM1Q2M3G4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.27■■□□□ 1.8
SHROOM1Q2M3G4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SHROOM1Q2M3G4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.27■■□□□ 1.8
SHROOM1Q2M3G4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SHROOM1Q2M3G4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SHROOM1Q2M3G4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SHROOM1Q2M3G4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.26■■□□□ 1.79
SHROOM1Q2M3G4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.26■■□□□ 1.79
SHROOM1Q2M3G4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.26■■□□□ 1.79
SHROOM1Q2M3G4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SHROOM1Q2M3G4 DUX4L4-201ENST00000566884 1269 ntBASIC26.26■■□□□ 1.79
SHROOM1Q2M3G4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.26■■□□□ 1.79
SHROOM1Q2M3G4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 AC144652.1-201ENST00000609974 1624 ntBASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 IGHV3-19-201ENST00000521488 291 ntBASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SHROOM1Q2M3G4 ABCB10P4-201ENST00000566803 2184 ntBASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SHROOM1Q2M3G4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 LINC00543-201ENST00000567234 1845 ntBASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 DUX4L2-201ENST00000561772 1275 ntBASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 IKBKGP1-201ENST00000612193 1073 ntBASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 DUX4L6-201ENST00000626483 1275 ntBASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 DUX4L1-201ENST00000627662 1275 ntBASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 DUX4L8-201ENST00000629013 1275 ntBASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 DUX4L3-201ENST00000630187 1275 ntBASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 DUX4L7-201ENST00000630678 1275 ntBASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 DUX4L5-201ENST00000630834 1275 ntBASIC26.23■■□□□ 1.79
SHROOM1Q2M3G4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SHROOM1Q2M3G4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SHROOM1Q2M3G4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.22■■□□□ 1.79
SHROOM1Q2M3G4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
SHROOM1Q2M3G4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
SHROOM1Q2M3G4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.22■■□□□ 1.79
SHROOM1Q2M3G4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
SHROOM1Q2M3G4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SHROOM1Q2M3G4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SHROOM1Q2M3G4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SHROOM1Q2M3G4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SHROOM1Q2M3G4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.21■■□□□ 1.79
SHROOM1Q2M3G4 YBX1P1-201ENST00000445822 960 ntBASIC26.21■■□□□ 1.79
SHROOM1Q2M3G4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.21■■□□□ 1.79
SHROOM1Q2M3G4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SHROOM1Q2M3G4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
SHROOM1Q2M3G4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SHROOM1Q2M3G4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.21■■□□□ 1.79
SHROOM1Q2M3G4 FP325331.1-202ENST00000623531 1380 ntBASIC26.2■■□□□ 1.79
SHROOM1Q2M3G4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
SHROOM1Q2M3G4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
SHROOM1Q2M3G4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SHROOM1Q2M3G4 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.2■■□□□ 1.78
SHROOM1Q2M3G4 OR2I1P-207ENST00000453522 948 ntBASIC26.2■■□□□ 1.78
SHROOM1Q2M3G4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.2■■□□□ 1.78
SHROOM1Q2M3G4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.2■■□□□ 1.78
SHROOM1Q2M3G4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.2■■□□□ 1.78
SHROOM1Q2M3G4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SHROOM1Q2M3G4 LINC01529-204ENST00000636474 1715 ntBASIC26.19■■□□□ 1.78
SHROOM1Q2M3G4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.19■■□□□ 1.78
SHROOM1Q2M3G4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SHROOM1Q2M3G4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.19■■□□□ 1.78
SHROOM1Q2M3G4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SHROOM1Q2M3G4 AC079630.1-202ENST00000618127 1840 ntBASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms